ReproRehab 2024

Educational Leadership Team

Name	Email
Sook-Lei Liew	sliew@usc.edu
James M. Finley	jmfinley@pt.usc.edu
Keith Lohse	Keith.Lohse@health.utah.edu
David Kennedy	david.kennedy@umassmed.edu
Jean-Baptiste Poline	jbpoline@gmail.com

This github repository has information and materials for the ReproRehab program. If you're new to github, you can click the "clone or download" button on this repository to download a zip file.

SCHEDULE

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Everyone: Unit 1 | Unit 2 | Unit 3

Pod-specific: Units 4-7

Everyone: Units8-24

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Kick-off event (Sept. 29-30) - Intro to ReproRehab

Why do we need reproducible methods in rehabilitation? Overview and principles of reproducible science. (Slack, Github)

Meetings	Date	Location
ReproRehab Kick-off	September 29-30	USC Health Sciences Campus
Pods	Contact TA	Zoom

Content	Video
Welcome to ReproRehab (15:40)
Principles of Reproducible Science (1:12:44)
ReproRehab Housekeeping (8:49)
Meet your 2022-2023 ReproRehab Leadership Team and TAs (23:53)
What is data science? And are you already doing it? (23:43)

Unit 2 - Reproducible Data Management/Organization

Basics of data organization, file formatting, naming for machine-readable data, meta- data. How to approach research questions with reproducibility in mind.

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Content	Video
Intro to Reproducible Principles for Data Analysis and Management (24:52)
Introduction to Data Analysis (39:42)
Data Standardization: A (very) short introduction (26:22)
DataLad Introduction (optional but highly recommended) (27:15)
GitHub Basics Tutorial (8:41)

Helpful Github Resource

Unit 3 - Open Datasets

FAIR data principles, open-source datasets, data transfer agreements, and ReproRehabDB (our database for courses/open datasets).

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Content	Video
Introduction to Unit 3 (3:26)
Unit 3: Introduction to FAIR Data (51:14)
NIH Data Sharing Policy (1:27:37)
Unit 3: Open Data and Data Sharing in Rehabilitation (Part 2) (25:58)
Unit 3: How to use ReproRehabDB (3:38)

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Units 4-7: POD-SPECIFIC CONTENT

For these four weeks, pods will select a curriculum based on learner’s needs.

ReproRehab will provide introductory and/or intermediate course curricula with asynchronous videos and hands-on exercises in Matlab, R, and/or python, as well as on data archiving, data management, and more (and pods are welcome to chose course content from outside sources as well).

Meetings	Date	Time	Location
Pods	1/wk	Contact TA	Zoom

Content	Playlist
ReproRehab: Introduction to R
ReproRehab: Introduction to Matlab
ReproRehab: Very First Time Programming in Python
ABCD-ReproNim Machine Learning Playlist

Unit 4

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Unit 5

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Unit 6

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

Nov 21 - No class, Thanksgiving Break

Unit 7

Meetings	Date	Time	Location
Pods	Contact TA	---	Zoom

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Units 8 - 24: EVERYONE

Unit 8 - Launching into self-guided learning

What types of online learning opportunities are available to rehabilitation researchers?

Meetings	Date	Time	Location
ReproRehab All Hands	December 5	11 - 12:30p PST	Zoom
Pods	Contact TA	---	Zoom

Content	Playlist
Unit 8: Where do we go from here? From the bootcamp to self guided learning

Units 9-24 (Nov 10 - Apr 8) - 4-MONTH SELF-GUIDED PROGRAM

Learning from online course materials and applying it to your own research; ASNR Meet-up

Meetings	Date	Time	Location
Pods (OPTIONAL)	Contact TA	---	Zoom
ASNR Attendees	TBD	---	ASNR

Content	Playlist
Find additional content on ReproRehabDB

If students have questions, post in appropriate Slack channel.

TAs and ELT have office hours.

Unit 24 (Apr 5) - Follow-up and evaluations

Presentations by Learners and TAs

Meetings	Date	Time	Location
Final ReproRehab All Hands	TBD	TBD	Zoom

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STAY UP TO DATE

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