fix: update variable names for input chimeras and self fasta in BlasC… #63
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| name: CI | |
| #on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| services: | |
| docker: | |
| image: docker:20.10.2-dind | |
| options: --privileged | |
| env: | |
| DOCKER_TLS_CERTDIR: /certs | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| - name: Set up Node.js | |
| uses: actions/setup-node@v2 | |
| with: | |
| node-version: "14" | |
| - name: Install dependencies | |
| run: | | |
| yarn install | |
| - name: Pull Docker container | |
| run: | | |
| docker pull pipecraft/cutadapt:4.4 | |
| - name: Run bioinformatics tests | |
| run: | | |
| node testData/cutadapt_test.js | |
| - name: Clean up | |
| run: docker system prune -f |