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@paninski-lab

Liam Paninski's Lab at Columbia University

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  1. lightning-pose lightning-pose Public

    Accelerated pose estimation and tracking using semi-supervised learning

    Python 268 44

  2. yass yass Public

    YASS: Yet Another Spike Sorter

    Python 70 15

  3. deepgraphpose deepgraphpose Public

    DeepGraphPose

    Python 32 10

  4. funimag funimag Public

    Compression, denoising and demixing of functional imaging recordings

    Python 28 7

  5. eks eks Public

    Ensembling and kalman smoothing for pose estimation

    Python 24 6

  6. tracking-diagnostics tracking-diagnostics Public

    A collection of tools for assessing the performance of pose estimation algorithms

    Jupyter Notebook 8 1

Repositories

Showing 10 of 13 repositories
  • lightning-pose Public

    Accelerated pose estimation and tracking using semi-supervised learning

    paninski-lab/lightning-pose’s past year of commit activity
    Python 268 MIT 44 9 3 Updated Jul 31, 2025
  • lp3d-analysis Public
    paninski-lab/lp3d-analysis’s past year of commit activity
    Python 2 MIT 1 4 0 Updated Jul 25, 2025
  • lightning-action Public

    Animal action segmentation toolbox

    paninski-lab/lightning-action’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jul 24, 2025
  • beast Public

    Behavioral analysis via self-supervised pretraining of transformers

    paninski-lab/beast’s past year of commit activity
    Python 7 MIT 0 2 0 Updated Jul 17, 2025
  • eks Public

    Ensembling and kalman smoothing for pose estimation

    paninski-lab/eks’s past year of commit activity
    Python 24 MIT 6 2 0 Updated Jul 16, 2025
  • keypoint-pseudo-labeler Public

    Use EKS as a pseudo-labeler to accelerate pose estimation projects

    paninski-lab/keypoint-pseudo-labeler’s past year of commit activity
    Jupyter Notebook 2 MIT 0 0 0 Updated Oct 28, 2024
  • tracking-diagnostics Public

    A collection of tools for assessing the performance of pose estimation algorithms

    paninski-lab/tracking-diagnostics’s past year of commit activity
    Jupyter Notebook 8 GPL-3.0 1 1 0 Updated May 3, 2024
  • deepgraphpose Public

    DeepGraphPose

    paninski-lab/deepgraphpose’s past year of commit activity
    Python 32 LGPL-3.0 10 10 8 Updated Nov 27, 2022
  • yass Public

    YASS: Yet Another Spike Sorter

    paninski-lab/yass’s past year of commit activity
    Python 70 Apache-2.0 15 3 2 Updated Sep 29, 2022
  • diptest Public Forked from alimuldal/diptest

    Python/C implementation of Hartigan & Hartigan's dip test, based on Martin Maechler's R package

    paninski-lab/diptest’s past year of commit activity
    C 0 17 0 0 Updated Aug 21, 2018
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