Ware Lab

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73 repositories

sorghum-webapp
Public
Code for the sorghumbase.org web site.
flask wordpress-api sorghumbase
CSS
•4•0•0•0•Updated Aug 27, 2025Aug 27, 2025
sorghum-search
Public
redux reactjs sorghumbase
JavaScript
•
MIT License
•0•0•0•17•Updated Aug 27, 2025Aug 27, 2025
gramene-search
Public
redux reactjs
JavaScript
•
MIT License
•0•0•0•0•Updated Jul 30, 2025Jul 30, 2025
release-notes
Public
2•1•3•0•Updated Jul 25, 2025Jul 25, 2025
gramene-ensembl
Public
Gramene's Ensembl plugins, extensions, configuration.
gramene perl
Perl
•
MIT License
•0•2•3•2•Updated Jul 18, 2025Jul 18, 2025
gramene-solr
Public
nodejs database solr gramene gramene-search javascript
JavaScript
•
Apache License 2.0
•0•0•2•0•Updated Jun 7, 2025Jun 7, 2025
fastaIdx
Public
redis backed api that mimics ensembl rest :species/sequence/region/:location (JSON only)
JavaScript
•
Apache License 2.0
•0•0•0•0•Updated Jun 4, 2025Jun 4, 2025
gramene-mongodb
Public
Gramene's MongoDB. ETL code
nodejs mongodb gramene gramene-search javascript database ontologies
JavaScript
•
MIT License
•4•1•12•0•Updated May 28, 2025May 28, 2025
gramene-mongodb-config
Public
gramene gramene-search
JavaScript
•
MIT License
•0•0•0•1•Updated May 16, 2025May 16, 2025
gramene-swagger
Public
Gramene web service interface, powered by swagger
nodejs javascript gramene gramene-search swagger
JavaScript
•0•1•6•0•Updated Mar 25, 2025Mar 25, 2025
gramene-sites
Public
Front end of gramene main and subsites
JavaScript
•
Apache License 2.0
•0•0•2•0•Updated Mar 7, 2025Mar 7, 2025
gramene-dbxrefs
Public
module for linking to external databases
gramene gramene-search
JavaScript
•
MIT License
•0•0•1•0•Updated Mar 4, 2025Mar 4, 2025
gramene-genetree-vis
Public
React client-side vis for Compara gene tree
reactjs gramene-search gramene
JavaScript
•2•3•21•10•Updated Feb 28, 2025Feb 28, 2025
wordpress_orm
Public
A Python wrapper around the WordPress JSON API.
Python
•
MIT License
•2•0•0•0•Updated Feb 7, 2025Feb 7, 2025
gramene-efp-browser
Public
JavaScript
•
Apache License 2.0
•0•0•0•0•Updated Jan 22, 2025Jan 22, 2025
flapjack-bytes
Public
BrAPI enabled Flapjack style graphical previews of genotype data
JavaScript
•
BSD 2-Clause "Simplified" License
•3•0•0•0•Updated Aug 2, 2024Aug 2, 2024
SbiCLIM
Public
HTML
•
Apache License 2.0
•1•0•0•0•Updated Aug 1, 2024Aug 1, 2024
gramene-curation
Public
Web application for gene curation.
gramene
Python
•0•2•7•6•Updated Jul 30, 2024Jul 30, 2024
NECorr
Public
R
•
MIT License
•2•2•0•0•Updated Jun 18, 2024Jun 18, 2024
gramene-search-vis
Public
Visualizations used in gramene-search
reactjs gramene gramene-search
JavaScript
•3•0•10•0•Updated Mar 25, 2024Mar 25, 2024
gramene-ebeye
Public
REST endpoint to furnish the Gramene ensembl site with search results
nodejs gramene gramene-search
JavaScript
•
MIT License
•0•0•0•0•Updated Feb 8, 2024Feb 8, 2024
gramene-mdview
Public
CSS
•
GNU General Public License v3.0
•0•0•0•0•Updated Jul 7, 2023Jul 7, 2023
gramene-search-scripts
Public
gramene gramene-search
JavaScript
•
MIT License
•0•0•1•0•Updated Jun 30, 2023Jun 30, 2023
gramene-alerts
Public
JavaScript
•
GNU General Public License v3.0
•0•0•0•0•Updated Feb 17, 2023Feb 17, 2023
gramoogle
Public
Gramene Search Interface
reactjs gramene gramene-search
CSS
•
MIT License
•4•0•19•18•Updated Dec 7, 2022Dec 7, 2022
tbrowse
Public
gene tree React component
JavaScript
•0•0•5•16•Updated Sep 19, 2022Sep 19, 2022
gramene-trees-client
Public
gramene gramene-search
JavaScript
•
MIT License
•2•0•0•0•Updated Nov 4, 2021Nov 4, 2021
gramene-bins-client
Public
Provide convenient API for working with gene distribution bins provided by data.gramene.org/genes
gramene gramene-search
JavaScript
•
MIT License
•2•0•2•0•Updated Nov 4, 2021Nov 4, 2021
gramene-search-client
Public
Javascript client for searching Gramene's API
gramene gramene-search
JavaScript
•
MIT License
•1•0•1•0•Updated Nov 4, 2021Nov 4, 2021
mdView
Public
react component to view markdown files from github
JavaScript
•0•0•0•0•Updated Apr 15, 2021Apr 15, 2021