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    35 repositories

    • thefaylab.github.io

      Public
      Website
      Lua
      •
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Aug 20, 2025Aug 20, 2025

    • sseep-analysis

      Public
      R
      •0•0•10•0•Updated Jul 29, 2025Jul 29, 2025

    • sseep-sim

      Public
      R
      •0•0•13•0•Updated Jul 29, 2025Jul 29, 2025

    • mafmc-recmeasures

      Public
      Code for runnning analyses for the 2023-2024 MAFMC recreational measures MSE
      R
      •3•0•2•1•Updated Jul 17, 2025Jul 17, 2025

    • lab-manual

      Public
      Fay Lab Manual / how we work
      TeX
      •
      Creative Commons Attribution 4.0 International
      •64•21•14•2•Updated Jun 16, 2025Jun 16, 2025

    • frame

      Public template
      Flounder Research for Actionable Management and Engagement, DISES project website
      Lua
      •
      Creative Commons Attribution 4.0 International
      •114•0•0•0•Updated Jun 4, 2025Jun 4, 2025

    • herring-ss-rtwg2024

      Public
      NE Atlantic herring Stock Synthesis application testing for RTWG 2024
      Scheme
      •1•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • dfo-seminar-f23

      Public
      UMassD Department of Fisheries Oceanography Seminar Series Fall 2023
      JavaScript
      •
      Creative Commons Attribution Share Alike 4.0 International
      •0•0•0•0•Updated Nov 30, 2023Nov 30, 2023

    • hydradata

      Public
      Create & document custom dat & pin files for hydra_sim
      R
      •
      Other
      •2•0•1•0•Updated Nov 22, 2023Nov 22, 2023

    • hydra_sim

      Public
      Code-base for the hydra multispecies simulation model
      HTML
      •2•2•15•0•Updated Nov 22, 2023Nov 22, 2023

    • nefmc-ebfm-pmse

      Public
      R
      •1•0•0•0•Updated Jul 28, 2023Jul 28, 2023

    • sseep

      Public
      Survey Simulation Experimentation and Evaluation Project
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•0•1•0•Updated Jul 10, 2023Jul 10, 2023

    • hydra_diag

      Public
      Diagnostics plots and tables for multispecies stock assessment models
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •2•2•13•0•Updated Jan 13, 2023Jan 13, 2023

    • sseep-manual

      Public
      documentation of workflows, data/file management and project organization for SSEEP
      TeX
      •0•0•0•0•Updated Nov 11, 2022Nov 11, 2022

    • hydra_diag_MaC

      Public
      Diagnostics plots and tables for multispecies stock assessment models
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •2•0•0•0•Updated Oct 5, 2022Oct 5, 2022

    • MS-SCAA

      Public
      Multispecies statistical-catch-at-age model
      Smarty
      •2•0•2•0•Updated Jul 21, 2022Jul 21, 2022

    • nbhs-dataviz

      Public
      R
      •0•0•0•0•Updated Jul 14, 2022Jul 14, 2022

    • qual-mod

      Public
      R
      •0•0•0•0•Updated Jul 14, 2022Jul 14, 2022

    • SimSurvey

      Public
      A tool for comparing the design and analysis of surveys by simulating spatially-correlated populations
      R
      •5•0•0•0•Updated Feb 16, 2022Feb 16, 2022

    • cinar-mse-projects

      Public
      Case study projects for the January 2022 CINAR MSE workshop
      R
      •1•0•2•0•Updated Jan 14, 2022Jan 14, 2022

    • roar-with-purrr

      Public
      Make your R code roar by purrring: an intro to purrr for UMassD quantfish workshop
      0•0•0•0•Updated Apr 7, 2020Apr 7, 2020

    • labhub

      Public
      Fay Labhub site. (Forked from apreshill/labhub - OHSU Open Science Workshop on tools and methods for building transparency within a lab)
      HTML
      •16•5•0•0•Updated Feb 26, 2020Feb 26, 2020

    • quantfishR_04_transform

      Public
      quantfish woRkshop 04 - data transformation in R
      R
      •0•0•0•0•Updated Dec 4, 2018Dec 4, 2018

    • quantfishR_03_wrangling

      Public
      Quantfish WorRkshop #3: data wrangling in R
      R
      •0•0•0•0•Updated Nov 27, 2018Nov 27, 2018

    • quantfishR_02_databasics

      Public
      Quantfish woRkshop session 2: data basics in R
      R
      •0•0•0•0•Updated Nov 20, 2018Nov 20, 2018

    • quantfishR_01_introR

      Public
      Introduction to R quantfishwoRkshop
      R
      •0•0•0•0•Updated Nov 15, 2018Nov 15, 2018

    • herringss

      Public
      NE Atlantic herring Stock Synthesis 2018
      Scheme
      •1•0•6•0•Updated May 11, 2018May 11, 2018

    • mar530

      Public
      MAR530 Ecosystem Based Fisheries Management class
      0•1•0•0•Updated Mar 7, 2017Mar 7, 2017

    • mebm

      Public
      Models for Ecosystem-Based Management
      0•1•0•0•Updated Feb 16, 2017Feb 16, 2017

    • r4ss

      Public
      files for r4ss package
      R
      •36•0•0•0•Updated Feb 8, 2017Feb 8, 2017