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@smart-on-fhir SMART on FHIR

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    130 repositories

    • cumulus-library

      Public
      A framework for designing, executing, and distributing SQL queries packaged as "studies", e.g., for quality monitoring, clinical research, or public health
      bioinformaticsfhirbdf-toolbox
      Python
      •
      Apache License 2.0
      •2•5•40•1•Updated Oct 31, 2025Oct 31, 2025

    • bulk-submit-consumer

      Public
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 31, 2025Oct 31, 2025

    • cumulus-etl

      Public
      Extract FHIR data, Transform with NLP and DEID tools, and then Load FHIR data into a SQL Database for analysis
      nlpbioinformaticsfhirbdf-toolbox
      Python
      •
      Apache License 2.0
      •4•19•17•3•Updated Oct 30, 2025Oct 30, 2025

    • smart-fetch

      Public
      Extract FHIR data from your EHR easily and completely
      fhirsmart-on-fhirfhir-clientbulk-fhirbdf-toolbox
      Python
      •
      Apache License 2.0
      •1•4•7•0•Updated Oct 29, 2025Oct 29, 2025

    • bulk-submit-provider

      Public
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 27, 2025Oct 27, 2025

    • kidney-transplant-llm

      Public
      Kidney Transplant LLM Prompts
      bdf-toolbox
      Python
      •
      Apache License 2.0
      •0•0•15•1•Updated Oct 23, 2025Oct 23, 2025

    • cumulus-library-kidney-transplant

      Public
      bdf-toolbox
      Python
      •0•0•16•0•Updated Oct 22, 2025Oct 22, 2025

    • cumulus-library-loinc

      Public
      A Cumulus library study for deploying the LOINC coding system to an athena database
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

    • client-js-examples

      Public
      Contains examples of how to use the client-js library
      HTML
      •6•1•0•5•Updated Oct 21, 2025Oct 21, 2025

    • cumulus-fhir-support

      Public
      FHIR support code for the Cumulus project
      bioinformaticsfhir
      Python
      •
      Apache License 2.0
      •0•1•2•0•Updated Oct 20, 2025Oct 20, 2025

    • cumulus-aggregator

      Public
      Python
      •
      Apache License 2.0
      •1•3•21•0•Updated Oct 14, 2025Oct 14, 2025

    • cumulus-library-data-metrics

      Public
      A data metrics study for the Cumulus project
      bdf-toolbox
      Jinja
      •
      Apache License 2.0
      •2•4•14•2•Updated Oct 13, 2025Oct 13, 2025

    • cumulus-kidney-transplant-examples

      Public
      Synthetic examples for kidney transplant study
      Python
      •0•1•0•0•Updated Oct 8, 2025Oct 8, 2025

    • chart-review

      Public
      Measure agreement between chart reviewers.
      bioinformaticslabel-studio
      Python
      •
      Apache License 2.0
      •1•6•10•1•Updated Oct 7, 2025Oct 7, 2025

    • cumulus

      Public
      Clinical investigation at population scale.
      Shell
      •
      Apache License 2.0
      •0•6•2•0•Updated Oct 6, 2025Oct 6, 2025

    • client-js

      Public
      JavaScript client for FHIR
      TypeScript
      •
      Other
      •232•327•27•1•Updated Sep 29, 2025Sep 29, 2025

    • sample-bulk-fhir-datasets

      Public
      Sample bulk export results of various sizes, for testing tools and workflows
      Shell
      •
      Apache License 2.0
      •3•26•1•0•Updated Sep 17, 2025Sep 17, 2025

    • cumulus-app

      Public
      bdf-toolbox
      TypeScript
      •
      Apache License 2.0
      •0•2•9•0•Updated Sep 16, 2025Sep 16, 2025

    • good-neighbor

      Public
      Ruby
      •0•2•0•0•Updated Aug 20, 2025Aug 20, 2025

    • infectious-symptoms-llm-study

      Public
      Detecting Infectious Respiratory Disease Symptoms using LLMs
      Python
      •
      Apache License 2.0
      •0•0•1•0•Updated Aug 12, 2025Aug 12, 2025

    • client-py

      Public
      Python SMART on FHIR client
      fhirsmart-on-fhirfhir-clientfhir-parser
      Python
      •
      Other
      •222•663•23•0•Updated Aug 1, 2025Aug 1, 2025

    • bulk-data-implementations

      Public
      listing of bulk FHIR client implementations
      Apache License 2.0
      •8•17•0•0•Updated Jul 31, 2025Jul 31, 2025

    • cumulus-library-catalog

      Public
      Browse hierarchies of pre-calculated counts for ICD10 Diagnosis, MEDRT/RxNorm medications, etc.
      bdf-toolbox
      Python
      •
      Apache License 2.0
      •1•1•0•0•Updated Jul 23, 2025Jul 23, 2025

    • cumulus-library-umls

      Public
      A Unified Medical Language System® Metathesaurus study for the Cumulus project
      bdf-toolbox
      Python
      •1•1•1•0•Updated Jul 22, 2025Jul 22, 2025

    • IBD-Case-Conference-Demo

      Public
      JavaScript
      •0•0•0•0•Updated Jul 22, 2025Jul 22, 2025

    • sample-patients-prom

      Public archive
      Provisional Quarterly Patient Reported Outcome Measures (PROMs) in England - April 2015 to March 2016, November 2016 release
      JavaScript
      •
      Other
      •4•6•0•0•Updated Jul 2, 2025Jul 2, 2025

    • bulk-match-provider

      Public
      Bulk Match Provider
      TypeScript
      •
      Apache License 2.0
      •1•3•0•0•Updated Jun 25, 2025Jun 25, 2025

    • cumulus-data-metrics-reporting

      Public
      Visualizations for FHIR data quality and characterization metrics generated with cumulus-library-data-metrics
      Python
      •
      Other
      •1•1•0•0•Updated Jun 24, 2025Jun 24, 2025

    • crawler-scripts

      Public archive
      Deprecated by smart-fetch
      Shell
      •
      Apache License 2.0
      •0•0•0•0•Updated May 23, 2025May 23, 2025

    • rapid-elastic

      Public
      Rapidly query clinical notes in Elasticsearch for mentions of diseases
      Python
      •
      Apache License 2.0
      •1•1•4•0•Updated May 21, 2025May 21, 2025