Open Problems in Single-Cell Analysis
30 packages
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metrics/ks_statistic_spatialPublished
Aug 6, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators735 -
metrics/density_preservationPublished
Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction723 -
metrics/clustering_performancePublished
Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction611 -
metrics/r2Published
Jul 15, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_decomposition427 -
metrics/emdPublished
Feb 13, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_cyto_batch_integration403 -
robustness_analysis/noise_grnPublished
Aug 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference400 -
metrics/kbet_pgPublished
Feb 28, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration374 -
metrics/average_batch_r2Published
Mar 12, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_cyto_batch_integration369 -
metrics/kbet_pg_labelPublished
Feb 28, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration369 -
metrics/trustworthinessPublished
Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction360 -
methods/mnnpyPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration341 -
metrics/n_inconsistent_peaksPublished
Mar 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_cyto_batch_integration326 -
methods/scanoramaPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration316 -
metrics/correlationPublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality314 -
methods/batchelor_mnn_correctPublished
Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration310 -
data_processors/process_datasetPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection307 -
metrics/msePublished
Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality296 -
metrics/downstreamPublished
Aug 16, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators294 -
metrics/flowsom_mapping_similarityPublished
May 22, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_cyto_batch_integration286 -
methods/pyligerPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration267 -
methods/xgboostPublished
Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection253 -
control_methods/shuffle_integration_by_cell_typePublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration253 -
control_methods/shuffle_integrationPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration252 -
methods/harmonypyPublished
Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration249 -
control_methods/shuffle_integration_by_batchPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration246 -
methods/ligerPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration243 -
methods/scviPublished
Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration242