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    26 repositories

    • ml_sarscov2

      Public
      Machine Learning Approach for Predicting CoVID-19 Cases and Classifying SARS-CoV-2 Variants
      Jupyter Notebook
      •
      MIT License
      •1•0•2•0•Updated Aug 7, 2025Aug 7, 2025

    • reproteomics

      Public
      The reproducibility crisis in proteomics - a bioinformatics perspective
      Python
      •
      MIT License
      •1•1•0•0•Updated Jul 28, 2025Jul 28, 2025

    • marburgdrug

      Public
      Machine Learning and Molecular Dynamics Simulations Predict Potential Compounds against Marburg Virus
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jul 11, 2025Jul 11, 2025

    • rareinsight

      Public
      RareInsight: Developing a rare disease report generator for clinicians and patients
      R
      •
      MIT License
      •3•6•0•0•Updated Jun 16, 2025Jun 16, 2025

    • exvar

      Public
      exvar: an R Package for Gene Expression and Genetic Variation (SNPs , Indels, and CNVs) Data Analysis and Visualization
      R
      •
      Artistic License 2.0
      •4•5•0•0•Updated Apr 22, 2025Apr 22, 2025

    • neurovar

      Public
      NeuroVar: A Genetic Expression and Variation data visualization tool for Neurological diseases’ biomarkers
      Python
      •
      Artistic License 2.0
      •1•2•0•0•Updated Apr 22, 2025Apr 22, 2025

    • denguedrug

      Public
      Machine Learning and Molecular Docking Prediction of Potential Inhibitors against Dengue Virus
      Jupyter Notebook
      •
      MIT License
      •1•8•0•0•Updated Jan 28, 2025Jan 28, 2025

    • epilepsy_var

      Public
      Integrated Analysis of Genetic Variation, Gene Expression and Methylation Changes in Epilepsy
      R
      •
      MIT License
      •2•3•0•0•Updated Dec 5, 2024Dec 5, 2024

    • rhinotypeR

      Public
      An R package for Rhinovirus Genotyping
      R
      •
      MIT License
      •1•4•0•0•Updated Nov 23, 2024Nov 23, 2024

    • prostruct

      Public
      ProStruct: A Python-based Tool for Homology Modeling and 3D Structure Prediction
      Python
      •
      MIT License
      •0•5•0•0•Updated Oct 31, 2024Oct 31, 2024

    • uhrf1cancer

      Public
      Uncovering DNA Methylation Signatures in Breast Cancer: An In-silico Approach
      HTML
      •
      MIT License
      •0•1•3•0•Updated Oct 29, 2024Oct 29, 2024

    • tgr5t2d

      Public
      Machine Learning and Molecular Dynamics Simulations Predict Potential TGR5 Agonists for Type 2 Diabetes Treatment
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

    • rshinyworkshop

      Public
      Workshop: Rshiny app development
      R
      •
      MIT License
      •1•1•0•0•Updated Jul 29, 2024Jul 29, 2024

    • gitworkshop

      Public
      A repository for GitHub class
      Shell
      •
      MIT License
      •14•2•1•0•Updated Jul 10, 2024Jul 10, 2024

    • hepadrug

      Public
      Drug Candidate Development against Non-alcoholic Steato Hepatitis
      Parrot
      •
      MIT License
      •0•1•0•0•Updated Jun 1, 2024Jun 1, 2024

    • capn10snp

      Public
      Uncovering Genetic Variations in the CAPN10 Gene: A Comprehensive SNP Analysis
      MIT License
      •0•1•0•0•Updated Apr 28, 2024Apr 28, 2024

    • aldosereduct2d

      Public
      Targeting Aldose Reductase as a Potential Therapeutic in Diabetes
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 23, 2024Apr 23, 2024

    • salmonellaml

      Public
      Predicting the Source of Salmonella Enterica: An Approach to Understanding Pathogen Surveilance
      Jupyter Notebook
      •
      MIT License
      •3•1•0•0•Updated Apr 21, 2024Apr 21, 2024

    • amr_cattle

      Public
      This is a comparative study of Antimicrobial Resistance (AMR) genes in cattle microbiome found in East African countries (Kenya, Uganda and Tanzania) using metagenomics
      HTML
      •
      MIT License
      •1•1•0•0•Updated Dec 3, 2023Dec 3, 2023

    • mendel_t1d

      Public
      Mendelian Randomization in Inferring Causal SNPs for Type 1 Diabetes
      MIT License
      •0•0•0•0•Updated May 15, 2023May 15, 2023

    • ace2_covid

      Public
      Expression Level Analysis of ACE2 Receptor Gene in COVID-19 Patients from African and Non-African Regions
      HTML
      •
      MIT License
      •0•1•0•0•Updated Jan 14, 2023Jan 14, 2023

    • phylotools_sars2

      Public
      Comparative Study between Molecular and Genetic Evolutionary Analysis Tools Using African SARS-CoV-2 Variants
      R
      •2•0•0•0•Updated Dec 9, 2022Dec 9, 2022

    • cdk1_crc

      Public
      In silico identification of CDK1 inhibitors in colorectal cancer
      cancermolecular-dynamics-simulationdrug-discoverydockingin-silicoinhibitorscdk1
      MIT License
      •0•0•0•0•Updated Sep 16, 2022Sep 16, 2022

    • gNBS_explore

      Public
      Exploring Genomic Newborn Screening using Public Next Generation Sequencing Data
      HTML
      •
      MIT License
      •0•0•0•0•Updated May 31, 2022May 31, 2022

    • HIV-1-Genetics-Africans

      Public
      Genetic Diversity of Strains of HIV-1 circulating in African Populations
      omics-oct-2021
      Python
      •
      MIT License
      •1•2•1•0•Updated Jan 11, 2022Jan 11, 2022

    • SARS-CoV-2-Vars

      Public
      Molecular and Genetic Evolutionary Analysis of African SARS-CoV-2 Variants to Inform Vaccine Efficacy
      omics-oct-2021
      Python
      •
      MIT License
      •0•1•1•0•Updated Oct 12, 2021Oct 12, 2021