Repositories list

• ProtSEC

  Public
  Protein Sequence Embedding in Complex Space

  complex-numbersfftembedding+ 2dimension-reductionblosum

  Python

  •

  Other

  •0•3•0•0•Updated Sep 20, 2025Sep 20, 2025

• sars-cov2-assembly-pipeline

  Public
  De novo assembly of SARS-CoV-2 genome

  denovo-assemblymegahitshort-reads+ 1covid-19

  HTML

  •0•2•0•0•Updated Sep 3, 2025Sep 3, 2025

• VirusTaxo

  Public
  VirusTaxo: Taxonomic classification of viruses from the genome sequence using k-mer enrichment

  genomicsmetagenomicsviruses+ 3taxonomic-classificationbioinformatics-toolmetagenomics-toolkit

  Python

  •

  MIT License

  •1•6•2•0•Updated Apr 7, 2025Apr 7, 2025

• VirusTaxo_Hierarchical

  Public
  Implementation of https://doi.org/10.1016/j.ygeno.2022.110414

  bioinformaticspython3supervised-learning+ 2classificationgenomics-data

  Roff

  •2•4•0•0•Updated Feb 13, 2023Feb 13, 2023