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    12 repositories

    • mothur

      Public
      Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
      C++
      •
      GNU General Public License v3.0
      •112•272•16•1•Updated Aug 11, 2025Aug 11, 2025

    • mothur.github.io

      Public
      wiki for the mothur software package
      CSS
      •
      Creative Commons Attribution 4.0 International
      •21•20•25•2•Updated Jul 14, 2025Jul 14, 2025

    • phylotypr

      Public
      Tools for Classifying DNA Sequences
      R
      •
      GNU General Public License v3.0
      •2•8•1•0•Updated Feb 21, 2025Feb 21, 2025

    • phylotyprrefdata

      Public
      Provides the RDP trainset19 16S rRNA Sequence Reference
      R
      •
      Other
      •1•1•0•0•Updated Nov 6, 2024Nov 6, 2024

    • mothurblog.github.io

      Public
      A semi-quantitative discussion of issues in microbial ecology
      CSS
      •
      MIT License
      •0•0•0•0•Updated Mar 13, 2024Mar 13, 2024

    • logo

      Public
      official mothur logo
      GNU General Public License v2.0
      •0•0•0•0•Updated Apr 5, 2022Apr 5, 2022

    • mothur_ami

      Public
      Repository to create and maintain an Amazon AMI for mothur
      MIT License
      •1•0•0•0•Updated May 7, 2019May 7, 2019

    • vsearch

      Public
      Versatile open-source tool for metagenomics
      C++
      •
      Other
      •128•1•0•0•Updated Mar 22, 2016Mar 22, 2016

    • slibshuff

      Public
      The original source code for the s-libshuff program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•1•0•0•Updated Jan 20, 2015Jan 20, 2015

    • TreeClimber

      Public
      Original source code from the TreeClimber program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jan 20, 2015Jan 20, 2015

    • SONS

      Public
      Original sources code for the SONS program (for historical purposes)
      C++
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Jan 20, 2015Jan 20, 2015

    • DOTUR

      Public
      The last version of DOTUR that was created (posted for historical reasons)
      C++
      •
      GNU General Public License v2.0
      •1•0•0•0•Updated Jan 20, 2015Jan 20, 2015