Repositories list

• RetroMol-GUI

  Public
  Graphical user interface for trying out RetroMol.

  natural-productsbiosynthesisretrobiosynthesis+ 1monomers

  TypeScript

  •

  MIT License

  •0•0•0•0•Updated Nov 10, 2025Nov 10, 2025

• RetroMol

  Public
  RetroMol is retrosynthetic analysis tool for modular natural products.

  natural-productsbiosynthesisretrobiosynthesis+ 1monomers

  Python

  •

  MIT License

  •0•1•0•0•Updated Nov 8, 2025Nov 8, 2025

• BioNexus

  Public
  Facilitates cross-modal retrieval between natural products and biosynthetic gene clusters.

  retrievalcross-modalnatural-products+ 1biosynthetic-gene-clusters

  Python

  •

  MIT License

  •0•1•0•0•Updated Nov 5, 2025Nov 5, 2025

• BioCracker

  Public
  Parser for antiSMASH output GenBank files.

  parserantismash

  Python

  •

  MIT License

  •0•1•0•0•Updated Nov 5, 2025Nov 5, 2025

• versalign

  Public
  Naive alignment for lists of arbitrary objects.

  alignmentmsapairwise+ 1arbitrary-objects

  Python

  •

  MIT License

  •1•4•1•0•Updated Oct 22, 2025Oct 22, 2025

• MolTools

  Public
  Toolbelt landing page.

  JavaScript

  •

  MIT License

  •0•3•0•0•Updated Aug 30, 2025Aug 30, 2025

• CineMol

  Public
  Direct-to-SVG small molecule drawer.

  visualizationscalable-vector-graphicsthree-dimensional-structure+ 1molecular-drawing

  Python

  •

  MIT License

  •4•27•0•0•Updated Feb 17, 2025Feb 17, 2025

• biosynfoni

  Public
  a *biosynformatic* fingerprint to explore natural product distance and diversity

  Python

  •

  MIT License

  •2•0•0•0•Updated May 15, 2024May 15, 2024

• .github

  Public
  0•0•0•0•Updated Jan 5, 2024Jan 5, 2024

• moltools.github.io

  Public
  MolTools landing page.

  HTML

  •0•0•0•0•Updated Jan 2, 2024Jan 2, 2024

• COMET

  Public
  COmparative Molecular Enrichment Tool

  Python

  •

  MIT License

  •0•2•0•0•Updated Jul 12, 2023Jul 12, 2023

• GraphMiner

  Public
  Python

  •0•1•0•0•Updated Jul 7, 2023Jul 7, 2023