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    9 repositories

    • rhythmic_sharing

      Public
      Glial-inspired ANN algorithm for unsupervised classification and zero-shot prediction of nonstationary dynamics. Based on dynamical systems theory with a bit of simplicial homotopy theory. Preprint of the manuscript available in the URL.
      Jupyter Notebook
      •2•1•0•1•Updated Sep 8, 2025Sep 8, 2025

    • NeuroART

      Public
      Real time analysis of neuronal population activity
      MATLAB
      •0•2•0•0•Updated Aug 19, 2025Aug 19, 2025

    • Python-BioImaging-Bootcamp

      Public
      Losert Lab Python BioImaging Bootcamp
      Jupyter Notebook
      •2•0•0•0•Updated Jun 30, 2024Jun 30, 2024

    • Filament_Displacement_imagetool

      Public
      Image analytics tool for use in investigating dense microtubule filament dynamics
      MATLAB
      •
      MIT License
      •1•0•0•0•Updated Feb 22, 2024Feb 22, 2024

    • Astrocyte_CollectiveNetworkInformation

      Public
      Tools used to analyze the calcium signaling in active astrocyte networks.
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Oct 27, 2023Oct 27, 2023

    • Compute-DF-F

      Public
      Compute DF/F of fluorescence in Calcium images
      MATLAB
      •0•0•0•0•Updated Dec 19, 2022Dec 19, 2022

    • UNet-D2min

      Public
      AI-based nucleus segmentation and tracking tool with downstream analysis of D2min
      MATLAB
      •
      Apache License 2.0
      •0•1•0•0•Updated Jan 20, 2022Jan 20, 2022

    • .github

      Public
      0•0•0•0•Updated Oct 12, 2021Oct 12, 2021

    • flowclustertracking

      Public
      Optical-flow and cluster-tracking analysis
      0•0•0•0•Updated Jul 9, 2021Jul 9, 2021