Repositories list

• web-monorepo

  Public
  A monorepo that contains all frontend code for VEuPathDB websites

  TypeScript

  •

  Apache License 2.0

  •0•3•214•27•Updated Aug 20, 2025Aug 20, 2025

• ApiCommonData

  Public
  Perl

  •

  Apache License 2.0

  •3•3•0•4•Updated Aug 19, 2025Aug 19, 2025

• ApiCommonModel

  Public
  Perl

  •

  Apache License 2.0

  •0•1•0•11•Updated Aug 19, 2025Aug 19, 2025

• vdi-service

  Public
  VEuPathDB Dataset Installer

  vdi

  Kotlin

  •

  Apache License 2.0

  •0•0•41•4•Updated Aug 19, 2025Aug 19, 2025

• iprscan5-nextflow

  Public
  Nextflow Conversion of Iprscan5Task

  Python

  •

  MIT License

  •1•0•0•0•Updated Aug 19, 2025Aug 19, 2025

• websiteconf

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•2•Updated Aug 19, 2025Aug 19, 2025

• service-eda

  Public
  Repo containing EDA web service

  Java

  •

  Apache License 2.0

  •0•0•23•2•Updated Aug 19, 2025Aug 19, 2025

• lib-jaxrs-container-core

  Public
  Core library for VEuPathDB JaxRS container services

  librarycontainersjaxrs

  Java

  •

  Apache License 2.0

  •0•0•12•2•Updated Aug 19, 2025Aug 19, 2025

• EbrcModelCommon

  Public
  Java

  •

  Apache License 2.0

  •2•1•2•6•Updated Aug 18, 2025Aug 18, 2025

• StaticContent

  Public
  HTML

  •

  Apache License 2.0

  •6•0•0•4•Updated Aug 18, 2025Aug 18, 2025

• WDK

  Public
  Java

  •

  Apache License 2.0

  •4•1•10•8•Updated Aug 12, 2025Aug 12, 2025

• install

  Public
  Shell

  •

  Apache License 2.0

  •2•0•1•21•Updated Aug 12, 2025Aug 12, 2025

• lib-jpath-request-validation

  Public
  Tools for validating JSON requests in JaxRS container services.

  jsonvalidationjaxrs

  Kotlin

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 12, 2025Aug 12, 2025

• OAuth2Server

  Public
  Java

  •

  Apache License 2.0

  •0•0•1•3•Updated Aug 12, 2025Aug 12, 2025

• ApiCommonWebsite

  Public
  Perl

  •

  Apache License 2.0

  •1•3•4•7•Updated Aug 11, 2025Aug 11, 2025

• lib-jackson-singleton

  Public
  Preconfigured Jackson & Utils

  jsonlibraryjackson

  Kotlin

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 11, 2025Aug 11, 2025

• EbrcWebsiteCommon

  Public
  Perl

  •

  Apache License 2.0

  •3•3•9•5•Updated Aug 9, 2025Aug 9, 2025

• TestDatasets

  Public
  Apache License 2.0

  •0•0•0•0•Updated Aug 7, 2025Aug 7, 2025

• ApiCommonWorkflow

  Public
  Perl

  •

  Apache License 2.0

  •1•0•0•1•Updated Aug 7, 2025Aug 7, 2025

• study-dealer-nextflow

  Public
  Deals studies to the wrangler

  R

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 7, 2025Aug 7, 2025

• ApidbSchema

  Public
  SQL and scripts to install the ApiDB schema

  PLSQL

  •

  Apache License 2.0

  •0•0•0•3•Updated Aug 6, 2025Aug 6, 2025

• long-read-rnaseq-nextflow

  Public
  Nextflow

  •

  Apache License 2.0

  •1•0•0•0•Updated Aug 5, 2025Aug 5, 2025

• service-multi-blast

  Public
  Async BLAST+ query service and supporting libraries.

  libraryqueryservice+ 4fastablastncbincbi-blast

  Kotlin

  •

  Apache License 2.0

  •0•0•19•0•Updated Aug 5, 2025Aug 5, 2025

• orthoFinder-nextflow

  Public
  orthoFinder Nextflow workflow

  Python

  •

  MIT License

  •0•0•0•0•Updated Aug 4, 2025Aug 4, 2025

• study-wrangler

  Public
  Code to keep study data tidy

  R

  •

  Apache License 2.0

  •0•0•24•1•Updated Aug 4, 2025Aug 4, 2025

• puppet-tcif

  Public
  Puppet module to manage EBRC's Tomcat Instance Framework

  Puppet

  •0•0•0•2•Updated Jul 30, 2025Jul 30, 2025

• puppet-ebrc_httpd_setup

  Public
  Puppet module to manage Apache HTTPD per EuPathDB specs

  Perl

  •0•0•0•0•Updated Jul 30, 2025Jul 30, 2025

• puppet-acme_vault

  Public
  Puppet

  •2•0•0•0•Updated Jul 30, 2025Jul 30, 2025

• tomcat-instance-framework

  Public
  Manage multiple Tomcat instances for EuPathDB

  Shell

  •

  Apache License 2.0

  •0•0•0•1•Updated Jul 29, 2025Jul 29, 2025

• lib-openapi-generator-plugins

  Public
  Kotlin

  •

  Apache License 2.0

  •0•0•1•0•Updated Jul 25, 2025Jul 25, 2025