Repositories list

• bih-alignment

  Public
  R

  •0•3•0•0•Updated Aug 4, 2025Aug 4, 2025

• mosaicatcher-pipeline-BIH

  Public
  Integrated workflow for SV calling from single-cell Strand-seq data

  Jupyter Notebook

  •

  MIT License

  •12•0•0•0•Updated Jul 2, 2025Jul 2, 2025

• TranslocatoR

  Public
  Find translocations in Mosaicatcher-analyzed Strand-seq data.

  R

  •2•0•0•0•Updated Apr 17, 2025Apr 17, 2025

• Awesome-Bioinformatics

  Public
  A curated list of awesome Bioinformatics libraries and software.

  646•0•0•0•Updated Feb 22, 2024Feb 22, 2024

• Tri-Channel-Plots

  Public
  R functions for tri-channel plotting of single cell Strand-seq data.

  R

  •0•1•0•0•Updated Feb 16, 2024Feb 16, 2024

• mosaicatcher-pipeline-BIH1

  Public
  Integrated workflow for SV calling from single-cell Strand-seq data

  Jupyter Notebook

  •

  MIT License

  •12•0•0•0•Updated Feb 14, 2024Feb 14, 2024

• strand-seq-read-plots

  Public
  R

  •1•1•0•0•Updated Aug 23, 2023Aug 23, 2023

• scNOVA

  Public
  scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis

  R

  •

  MIT License

  •3•1•0•0•Updated Aug 18, 2023Aug 18, 2023

• CNV-Callers-scRNAseq

  Public
  R

  •

  GNU General Public License v3.0

  •0•3•0•0•Updated Aug 15, 2023Aug 15, 2023

• Sanders-Lab

  Public
  0•0•0•0•Updated May 31, 2023May 31, 2023