Repositories list

• flu-ngs

  Public
  NGS pipeline for influenza virus libraries

  snakemakepipelinengs+ 5influenzaflungs-analysisngs-pipelinesnakemake-workflow

  Python

  •

  MIT License

  •0•3•1•1•Updated Oct 10, 2025Oct 10, 2025

• flu-covid-coadministration

  Public
  Data and code from a study comparing ipsilateral and contralateral coadministration of influenza and COVID-19 vaccines

  bayesian-inferenceinfluenzavaccination+ 1covid-19

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

• ititer

  Public
  Infer inflection or endpoint titers from serial dilution assays.

  Python

  •

  MIT License

  •0•3•1•0•Updated Sep 19, 2023Sep 19, 2023

• SARS2-mut-fitness

  Public
  Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates

  Jupyter Notebook

  •

  MIT License

  •5•0•0•0•Updated Feb 24, 2023Feb 24, 2023