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@CTPLab Computational and Translational Pathology (CTP)

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    9 repositories

    • Tera-MIND

      Public
      3D mouse brain modeling using spatial mRNA data
      mouse-braindiffusion-modelgenaivirtual-organism
      Python
      •
      MIT License
      •2•1•0•0•Updated Jun 24, 2025Jun 24, 2025

    • PUMA2024_P4U2

      Public
      PUMA 2024 - Candidate Solution - Cell Detection and Classification with a U-Net Model - Inference Pipeline
      0•0•0•0•Updated Mar 15, 2025Mar 15, 2025

    • GILEA

      Public
      Python
      •
      Other
      •1•4•0•0•Updated Jul 23, 2024Jul 23, 2024

    • IST-editing

      Public
      Gigapixel WSI generation, gene expression editing, GAN
      Python
      •
      Other
      •1•2•0•0•Updated Jul 2, 2024Jul 2, 2024

    • SST-editing

      Public
      [Accepted by Bioinformatics] Spatial transcriptomic editing, GAN, gene expression, bioimage, single-cell
      Python
      •
      Other
      •0•1•0•0•Updated Jul 2, 2024Jul 2, 2024

    • AutoCI

      Public
      Python
      •
      MIT License
      •2•8•0•0•Updated May 1, 2024May 1, 2024

    • OCELOT2023_P4ResNet50

      Public
      OCELOT 2023 - Candidate Solution - Cell Detection with a ResNet Ensemble Model - Inference Pipeline
      Python
      •0•1•0•0•Updated Nov 24, 2023Nov 24, 2023

    • IID_representation_learning

      Public
      Python
      •
      MIT License
      •0•3•0•0•Updated Mar 1, 2022Mar 1, 2022

    • hover_net

      Public
      Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.
      Python
      •
      MIT License
      •252•0•0•0•Updated Mar 25, 2021Mar 25, 2021