Repositories list

• computational_bioengineering

  Public
  HTML

  •0•0•0•0•Updated Sep 21, 2025Sep 21, 2025

• dc_bio

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Jul 25, 2025Jul 25, 2025

• solve_ivp_pint

  Public
  ODE solver with unit support using Pint

  odeunitspint+ 1scipy-integrate

  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Jun 23, 2025Jun 23, 2025

• bcrnnoise

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated May 4, 2025May 4, 2025

• vEcoli

  Public
  Whole cell model of E. coli implemented with Vivarium

  Jupyter Notebook

  •

  MIT License

  •14•0•0•0•Updated Mar 7, 2025Mar 7, 2025

• python-control

  Public
  The Python Control Systems Library is a Python module that implements basic operations for analysis and design of feedback control systems.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •444•0•0•0•Updated Mar 3, 2025Mar 3, 2025

• python-template

  Public template
  A template repository for Python development

  Python

  •

  MIT License

  •1•2•0•0•Updated Dec 10, 2024Dec 10, 2024

• algae_count

  Public
  counts algae in microscopy data

  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 12, 2024Mar 12, 2024

• dreamy-website

  Public
  HTML

  •0•0•0•0•Updated Dec 1, 2023Dec 1, 2023

• simpool

  Public
  Python

  •2•1•0•0•Updated Oct 24, 2023Oct 24, 2023

• microscopy

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Sep 30, 2023Sep 30, 2023

• ecolitracking

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Sep 26, 2023Sep 26, 2023

• alle_effect_for_rare_event

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Sep 14, 2023Sep 14, 2023