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    4 repositories

    • IRF

      Public
      Inverted Repeats Finder: a program to analyze DNA and RNA sequences
      C
      •
      GNU Affero General Public License v3.0
      •4•19•1•0•Updated Feb 21, 2025Feb 21, 2025

    • Bitwise-Edit-Distance-Unit-Cost-15-Operations

      Public
      This repository contains code for bitwise unit cost edit distance in 15 bit, logic, and addition operations.
      C
      •
      GNU Affero General Public License v3.0
      •0•3•0•0•Updated Sep 12, 2023Sep 12, 2023

    • VNTRseek

      Public
      VNTRSeek is a computational pipeline for the detection of VNTRs in short read sequencing data. It was developed by Yevgeniy Gelfand, Yozen Hernandez, and Gary Benson, with contributions from Marzie Rasekh, and more recently streamlined by Kyler Anderson in the Benson Lab for Biocomputing and Informatics at Boston University.
      C
      •
      GNU General Public License v3.0
      •0•2•12•0•Updated Jul 2, 2023Jul 2, 2023

    • TRF

      Public
      Tandem Repeats Finder: a program to analyze DNA sequences
      C
      •
      GNU Affero General Public License v3.0
      •29•185•32•0•Updated Jan 16, 2023Jan 16, 2023