Repositories list

• website

  Public
  Our website

  HTML

  •

  MIT License

  •3•1•0•0•Updated Aug 2, 2025Aug 2, 2025

• context-review

  Public
  HTML

  •

  Creative Commons Attribution 4.0 International

  •6•13•5•0•Updated Jul 31, 2025Jul 31, 2025

• dgm-fall-2025

  Public
  SCSS

  •

  MIT License

  •0•0•0•0•Updated Jun 28, 2025Jun 28, 2025

• pgm-spring-2025

  Public
  Course webpage for PGMs, Spring 2025

  modelsgraphicalprobabilistic

  TeX

  •

  MIT License

  •104•1•0•1•Updated Jun 6, 2025Jun 6, 2025

• .github

  Public
  0•0•0•0•Updated Jun 3, 2025Jun 3, 2025

• easy-gpt

  Public
  A teaching introduction to GPT

  Python

  •0•2•0•0•Updated Apr 15, 2025Apr 15, 2025

• ConferenceCountdown

  Public
  Webpage used to countdown time until ML/Compbio conference deadlines

  JavaScript

  •

  MIT License

  •0•5•0•0•Updated Jan 14, 2025Jan 14, 2025

• ReadingList

  Public
  Our reading list

  0•1•0•0•Updated Oct 11, 2024Oct 11, 2024

• clehrity

  Public
  Automatically finding surprises in EHRs

  Python

  •

  MIT License

  •0•8•0•19•Updated Aug 21, 2024Aug 21, 2024

• website_utils

  Public
  Utilities for making a website

  Python

  •

  MIT License

  •0•2•0•0•Updated Jun 13, 2024Jun 13, 2024

• CompBioDatasetsForMachineLearning

  Public
  A Curated List of Computational Biology Datasets Suitable for Machine Learning

  computational-biologycurated-listdatasets+ 4biomedical-data-sciencemachine-learningdatasetcomputational-biology-datasets

  25•179•0•0•Updated Apr 19, 2024Apr 19, 2024

• ebm_utils

  Public
  Utilities for Explainable Boosting Machines

  Python

  •

  MIT License

  •2•3•1•0•Updated Nov 30, 2023Nov 30, 2023

• ClinicalMLZoo

  Public
  A zoo of publicly available ML models for clinical tasks.

  MIT License

  •0•0•0•0•Updated Sep 20, 2023Sep 20, 2023

• DeathByRoundNumbers

  Public
  Glass-box ML reveals biases in medical practice at round number thresholds

  ehrinterpretable-machine-learning

  Jupyter Notebook

  •

  MIT License

  •1•2•0•0•Updated Feb 23, 2023Feb 23, 2023

• gam_purification

  Public
  Utilities for Purifying Generalized Additive Models

  Python

  •

  MIT License

  •1•2•1•0•Updated Nov 5, 2022Nov 5, 2022

• Dropout_Interactions

  Public
  Code for "Dropout as a Regularizer of Interaction Effects"

  Jupyter Notebook

  •0•1•0•0•Updated Apr 23, 2022Apr 23, 2022

• GO_Translator

  Public
  Simple utility functions for handling GO Terms in Python.

  gene-ontology

  Python

  •

  MIT License

  •0•2•0•0•Updated Jul 7, 2019Jul 7, 2019