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Fix examples and tests for wdl 1.2. #702

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e43e042
Update GOVERNANCE.md (#681)
peterhuene Aug 19, 2024
531eded
Update README.md
markjschreiber Sep 25, 2024
3c65214
Merge pull request #686 from openwdl/markjschreiber-patch-1
markjschreiber Sep 26, 2024
439a2bc
docs: fix table formatting
claymcleod Jan 14, 2025
a0ef626
docs: add `claymcleod` to governance committee
claymcleod Jan 14, 2025
585d984
docs: updates the `README.md` content
claymcleod Nov 16, 2024
ea49e2e
chore: adds new pull request template
claymcleod Jan 23, 2025
bcd123c
chore: further tweak the pull request template
claymcleod Jan 26, 2025
dc848bd
chore: moves governance information to `openwdl/governance`
claymcleod Jan 28, 2025
e10c64e
chore: updates README.md header image
claymcleod Feb 6, 2025
7e9ebb4
Fix examples and tests for wdl 1.2.
vsmalladi Feb 12, 2025
3f20cca
Add in chagnelon about changes.
vsmalladi Feb 13, 2025
a2eaf16
Merge branch 'wdl-1.2.1' into fix-test
vsmalladi Feb 13, 2025
91b6017
ci: adds issue triaging ci workflow
claymcleod Feb 16, 2025
682b67f
Fix json formating for running tests as valid input.
vsmalladi Feb 19, 2025
cc4e729
Tail was wrong the tail of cities is Chicago and Piscataway.
vsmalladi Feb 19, 2025
d5e4da3
Fix input examples to match task level inputs.
vsmalladi Feb 19, 2025
43ac011
Fix input examples to match task level inputs.
vsmalladi Feb 19, 2025
a5a69f8
Merge branch 'wdl-1.2' into fix-test
vsmalladi Feb 19, 2025
6c026e2
Fix missing output that is missing.
vsmalladi Feb 20, 2025
8b5d118
Reverse commit. Should not be an error.
vsmalladi Feb 20, 2025
2d7310b
Fix examples in spec.
vsmalladi Feb 26, 2025
a12d4a7
Merge branch 'fix-test' of github.com:openwdl/wdl into fix-test
vsmalladi Feb 26, 2025
3ea63db
Fix exclusion of output.
vsmalladi Feb 26, 2025
ee6f32d
Fix name of task to test so that it gets parse correctly.
vsmalladi Feb 26, 2025
0688da0
Fix example.
vsmalladi Feb 28, 2025
997142c
Fix hisat2 example. Close #707.
vsmalladi Mar 4, 2025
e32ba64
Fix some dangling issues.
vsmalladi Mar 4, 2025
714a232
Fix some dangling issues.
vsmalladi Mar 4, 2025
944ce1b
Add in null optional type. Will not fail if not present. Closes issue…
vsmalladi Apr 8, 2025
3aea0dc
Fix spec example.
vsmalladi Apr 8, 2025
f9170c5
Fix spec example to meet actually behavior. Seems like example was no…
vsmalladi Apr 8, 2025
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14 changes: 11 additions & 3 deletions .github/PULL_REQUEST_TEMPLATE.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,12 @@
_Describe the change you implemented and link to any relevant issues._

### Checklist
- [ ] Pull request details were added to CHANGELOG.md
- [ ] Valid examples WDL's were added or updated to the SPEC.md (see the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) on writing markdown tests)
Before submitting this PR, please make sure:

- [ ] You have added a few sentences describing the PR here.
- [ ] You have added yourself or the appropriate individual as the assignee.
- [ ] You have updated the `README.md` or other documentation to account for these
changes (when appropriate).
- [ ] You have updated the `CHANGELOG.md` describing the change and linking back to your pull request.
- [ ] You have read and agree to the [`CONTRIBUTING.md`](https://github.com/openwdl/wdl/blob/wdl-1.2/CONTRIBUTING.md) document.
- [ ] You have added or updated relevant example WDL tests to the specification.
- See the [guide](https://github.com/openwdl/wdl-tests/blob/main/docs/MarkdownTests.md) for more details.
75 changes: 75 additions & 0 deletions .github/assets/readme-header.svg
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20 changes: 20 additions & 0 deletions .github/workflows/triage.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
name: Triage issues

on:
issues:
types:
- reopened
- opened

jobs:
label_issues:
runs-on: ubuntu-latest
permissions:
issues: write
steps:
- run: gh issue edit "$NUMBER" --add-label "$LABELS"
env:
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
GH_REPO: ${{ github.repository }}
NUMBER: ${{ github.event.issue.number }}
LABELS: S01-needs-triage
1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,7 @@ Keep the changelog pleasant to read in the text editor:
version 1.2.1
---------------------------

* Include fixes to examples that don't comile in `wdl-tests`
* Clarify that `disks` mount points ephemeral and should not already exist

* Deprecate the use of relative path literals in input and private variable declarations.
Expand Down
30 changes: 0 additions & 30 deletions CONTRIBUTING.md

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35 changes: 0 additions & 35 deletions GOVERNANCE.md

This file was deleted.

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