This repository includes all figures and supplementary files for the thesis entitled: "Evolution of drug resistance and associated trade offs in non albicans Candida pathogens"
In each of the folders shown are the files in PDF or .xlsx in the case of the tables:
Chapter 1: Simple large-scale quantitative phenotyping and antimicrobial susceptibility testing with Q-PHAST
Chapter 2: The genomic landscape of acquired drug resistance in the Candida parapsilosis complex
Chapter 3: Uncovering actionable trade-offs of antifungal resistance in a yeast pathogen