NRNB GSoC 2025 Projects and Work Products

Ayush Baranwal - Jawaharlal Nehru University, New Dehli, India

Developing a highly efficient numerical ODE solver in Systems Biology Simulation Core Library

Michael Gaas - Eberhard-Karl University Tübingen, Tübingen, Germany

Enhancing the Systems Biology Simulation Core Library (SBSCL) with a Solver-Agnostic Framework for Constraint-Based Simulation and Analysis

Jiahui Hu - Northeastern University, Boston, USA

Enhancing SBOannotator with LLM Integration and Dynamic Term Retrieval

Hikmet Emre Kaya - University of Cape Town, Cape Town, South Africa

CySBML Reloaded: Smarter, Simpler, Automated

Kacem Mathlouthi - National Institute of Applied Science and Technology, Carthage University, Tunis, Tunisia

Chatbot to query VCell modeling resources

Milit Patel - The University of Texas, Austin, USA

LLM-Powered Interactive Chat Interface for CellMinerCDB with GraphRAG Integration

Sai Wong - San Jose State University, San Jose, USA

SeqTrainer - creating datasets from SynBioHub to aid researchers in creating machine learning models