First pass of the Nextflow Run course

[vdauwera]

Course outline

• Run basic operations (Hello World level)
• Run pipelines (channels for multiple inputs, multi-step example, modules, containers)
• Configuration

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planned for later

• Run nf-core pipelines
• Run with Seqera (with tower, platform, AI)

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[mribeirodantas]

Commands that would be interesting to have in the Nextflow Run training in more detail:

For a shorter Nextflow Run:

• nextflow pull
• nextflow list
• nextflow view
• nextflow inspect
• nextflow run
• nextflow clean
• nextflow log
• nextflow config
• nextflow plugin

In case we don't mind length:

• nextflow lineage
• nextflow secrets