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Merge branch 'release/0.0.2'
2 parents 223685d + 5addcd5 commit 06f737a

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lines changed

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example_cwl_input.json

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{
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"r1": {
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"class": "File",
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"path": "/path/to/your/input/R1.fastq.gz"
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},
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"r2": {
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"class": "File",
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"path": "/path/to/your/input/R2.fastq.gz"
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},
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"threshold": 120000000,
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"seed": 11,
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"output-prefix": "subsampled",
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"output-dir": {
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"class": "Directory",
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"path": "/path/to/your/output/directory"
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}
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}

subsample_fastq.cwl

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ramMin: 48000
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coresMin: 4
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- class: DockerRequirement
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dockerPull: ghcr.io/msk-access/subsample_fastq:0.0.1
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dockerPull: ghcr.io/msk-access/subsample_fastq:0.0.2
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'dct:contributor':
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- class: 'foaf:Organization'
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'foaf:member':
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'foaf:name': Memorial Sloan Kettering Cancer Center
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'doap:release':
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- class: 'doap:Version'
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'doap:name': merge_fastq
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'doap:revision': 0.1.1
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'doap:name': subsample_fastq
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'doap:revision': 0.0.2

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