Fix: Prevent session manager shutdown on individual session crash

src/mcp/server/streamable_http.py

@@ -173,6 +173,11 @@ def __init__(
         ] = {}
         self._terminated = False
 
+    @property
+    def is_terminated(self) -> bool:
+        """Check if this transport has been explicitly terminated."""
+        return self._terminated
+
     def _create_error_response(
         self,
         error_message: str,

src/mcp/server/streamable_http_manager.py

@@ -52,7 +52,6 @@ class StreamableHTTPSessionManager:
         json_response: Whether to use JSON responses instead of SSE streams
         stateless: If True, creates a completely fresh transport for each request
                    with no session tracking or state persistence between requests.
-
     """
 
     def __init__(
@@ -173,12 +172,15 @@ async def run_stateless_server(*, task_status: TaskStatus[None] = anyio.TASK_STA
             async with http_transport.connect() as streams:
                 read_stream, write_stream = streams
                 task_status.started()
-                await self.app.run(
-                    read_stream,
-                    write_stream,
-                    self.app.create_initialization_options(),
-                    stateless=True,
-                )
+                try:
+                    await self.app.run(
+                        read_stream,
+                        write_stream,
+                        self.app.create_initialization_options(),
+                        stateless=True,
+                    )
+                except Exception:
+                    logger.exception("Stateless session crashed")
 
         # Assert task group is not None for type checking
         assert self._task_group is not None
@@ -233,12 +235,31 @@ async def run_server(*, task_status: TaskStatus[None] = anyio.TASK_STATUS_IGNORE
                     async with http_transport.connect() as streams:
                         read_stream, write_stream = streams
                         task_status.started()
-                        await self.app.run(
-                            read_stream,
-                            write_stream,
-                            self.app.create_initialization_options(),
-                            stateless=False,  # Stateful mode
-                        )
+                        try:
+                            await self.app.run(
+                                read_stream,
+                                write_stream,
+                                self.app.create_initialization_options(),
+                                stateless=False,  # Stateful mode
+                            )
+                        except Exception as e:
+                            logger.error(
+                                f"Session {http_transport.mcp_session_id} crashed: {e}",
+                                exc_info=True,
+                            )
+                        finally:
+                            # Only remove from instances if not terminated
+                            if (
+                                http_transport.mcp_session_id
+                                and http_transport.mcp_session_id in self._server_instances
+                                and not http_transport.is_terminated
+                            ):
+                                logger.info(
+                                    "Cleaning up crashed session "
+                                    f"{http_transport.mcp_session_id} from "
+                                    "active instances."
+                                )
+                                del self._server_instances[http_transport.mcp_session_id]
 
                 # Assert task group is not None for type checking
                 assert self._task_group is not None

tests/server/test_streamable_http_manager.py

@@ -1,9 +1,12 @@
 """Tests for StreamableHTTPSessionManager."""
 
+from unittest.mock import AsyncMock
+
 import anyio
 import pytest
 
 from mcp.server.lowlevel import Server
+from mcp.server.streamable_http import MCP_SESSION_ID_HEADER
 from mcp.server.streamable_http_manager import StreamableHTTPSessionManager
 
 
@@ -71,3 +74,126 @@ async def send(message):
         await manager.handle_request(scope, receive, send)
 
     assert "Task group is not initialized. Make sure to use run()." in str(excinfo.value)
+
+
+class TestException(Exception):
+    __test__ = False  # Prevent pytest from collecting this as a test class
+    pass
+
+
+@pytest.fixture
+async def running_manager():
+    app = Server("test-cleanup-server")
+    # It's important that the app instance used by the manager is the one we can patch
+    manager = StreamableHTTPSessionManager(app=app)
+    async with manager.run():
+        # Patch app.run here if it's simpler, or patch it within the test
+        yield manager, app
+
+
+@pytest.mark.anyio
+async def test_stateful_session_cleanup_on_graceful_exit(running_manager):
+    manager, app = running_manager
+
+    mock_mcp_run = AsyncMock(return_value=None)
+    # This will be called by StreamableHTTPSessionManager's run_server -> self.app.run
+    app.run = mock_mcp_run
+
+    sent_messages = []
+
+    async def mock_send(message):
+        sent_messages.append(message)
+
+    scope = {
+        "type": "http",
+        "method": "POST",
+        "path": "/mcp",
+        "headers": [(b"content-type", b"application/json")],
+    }
+
+    async def mock_receive():
+        return {"type": "http.request", "body": b"", "more_body": False}
+
+    # Trigger session creation
+    await manager.handle_request(scope, mock_receive, mock_send)
+
+    # Extract session ID from response headers
+    session_id = None
+    for msg in sent_messages:
+        if msg["type"] == "http.response.start":
+            for header_name, header_value in msg.get("headers", []):
+                if header_name.decode().lower() == MCP_SESSION_ID_HEADER.lower():
+                    session_id = header_value.decode()
+                    break
+            if session_id:  # Break outer loop if session_id is found
+                break
+
+    assert session_id is not None, "Session ID not found in response headers"
+
+    # Ensure MCPServer.run was called
+    mock_mcp_run.assert_called_once()
+
+    # At this point, mock_mcp_run has completed, and the finally block in
+    # StreamableHTTPSessionManager's run_server should have executed.
+
+    # To ensure the task spawned by handle_request finishes and cleanup occurs:
+    # Give other tasks a chance to run. This is important for the finally block.
+    await anyio.sleep(0.01)
+
+    assert session_id not in manager._server_instances, (
+        "Session ID should be removed from _server_instances after graceful exit"
+    )
+    assert not manager._server_instances, "No sessions should be tracked after the only session exits gracefully"
+
+
+@pytest.mark.anyio
+async def test_stateful_session_cleanup_on_exception(running_manager):
+    manager, app = running_manager
+
+    mock_mcp_run = AsyncMock(side_effect=TestException("Simulated crash"))
+    app.run = mock_mcp_run
+
+    sent_messages = []
+
+    async def mock_send(message):
+        sent_messages.append(message)
+        # If an exception occurs, the transport might try to send an error response
+        # For this test, we mostly care that the session is established enough
+        # to get an ID
+        if message["type"] == "http.response.start" and message["status"] >= 500:
+            pass  # Expected if TestException propagates that far up the transport
+
+    scope = {
+        "type": "http",
+        "method": "POST",
+        "path": "/mcp",
+        "headers": [(b"content-type", b"application/json")],
+    }
+
+    async def mock_receive():
+        return {"type": "http.request", "body": b"", "more_body": False}
+
+    # Trigger session creation
+    await manager.handle_request(scope, mock_receive, mock_send)
+
+    session_id = None
+    for msg in sent_messages:
+        if msg["type"] == "http.response.start":
+            for header_name, header_value in msg.get("headers", []):
+                if header_name.decode().lower() == MCP_SESSION_ID_HEADER.lower():
+                    session_id = header_value.decode()
+                    break
+            if session_id:  # Break outer loop if session_id is found
+                break
+
+    assert session_id is not None, "Session ID not found in response headers"
+
+    mock_mcp_run.assert_called_once()
+
+    # Give other tasks a chance to run to ensure the finally block executes
+    await anyio.sleep(0.01)
+
+    assert session_id not in manager._server_instances, (
+        "Session ID should be removed from _server_instances after an exception"
+    )
+    assert not manager._server_instances, "No sessions should be tracked after the only session crashes"