Skip to content

Conversation

@smoe
Copy link
Contributor

@smoe smoe commented Aug 14, 2019

Without that dependency, many build errors pop up:

/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:32: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:33: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:3: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Beta;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:4: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Erf;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:5: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:6: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:7: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.MathUtils;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: package org.apache.commons.math3.special does not exist
import static org.apache.commons.math3.special.Beta.regularizedBeta;
                                              ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: static import only from classes and interfaces
import static org.apache.commons.math3.special.Beta.regularizedBeta;
^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: package org.apache.commons.math3.util does not exist
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;
                                           ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: static import only from classes and interfaces
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;

Without that dependency, many build errors pop up:
```
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:32: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/MathUtil.java:33: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:3: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Beta;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:4: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Erf;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:5: error: package org.apache.commons.math3.special does not exist
import org.apache.commons.math3.special.Gamma;
                                       ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:6: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.FastMath;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:7: error: package org.apache.commons.math3.util does not exist
import org.apache.commons.math3.util.MathUtils;
                                    ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: package org.apache.commons.math3.special does not exist
import static org.apache.commons.math3.special.Beta.regularizedBeta;
                                              ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:9: error: static import only from classes and interfaces
import static org.apache.commons.math3.special.Beta.regularizedBeta;
^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: package org.apache.commons.math3.util does not exist
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;
                                           ^
/home/moeller/git/med-team/vdjtools/vdjtools/src/main/java/com/antigenomics/vdjtools/misc/StatUtil.java:10: error: static import only from classes and interfaces
import static org.apache.commons.math3.util.CombinatoricsUtils.binomialCoefficientLog;
```
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant