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Do bwa indexing inside the pipeline

Status: Open.

#9 In melbournebioinformatics/variant_calling_pipeline;

· claresloggett opened on Mar 14, 2014

Add test data for exome pipeline

Status: Open.

#6 In melbournebioinformatics/variant_calling_pipeline;

· claresloggett opened on Jul 17, 2013

Document the output directory structure

Status: Open.

#4 In melbournebioinformatics/variant_calling_pipeline;

· claresloggett opened on Jul 12, 2013

Add better documentation for ENSEMBL VEP

Status: Open.

#3 In melbournebioinformatics/variant_calling_pipeline;

· claresloggett opened on Jul 11, 2013

Handle single-end reads

Status: Open.

#2 In melbournebioinformatics/variant_calling_pipeline;

· claresloggett opened on Jul 11, 2013