Merge pull request #26 from MBARIMike/main #245
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| - name: Install Poetry | |
| run: | | |
| curl -sSL https://install.python-poetry.org | python3 - | |
| echo "$HOME/.local/bin" >> $GITHUB_PATH | |
| - name: Install dependencies | |
| run: poetry install | |
| - name: Run pre-commit | |
| run: poetry run pre-commit run --all-files | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| - name: Install Poetry | |
| run: | | |
| curl -sSL https://install.python-poetry.org | python3 - | |
| echo "$HOME/.local/bin" >> $GITHUB_PATH | |
| - name: Install dependencies | |
| run: poetry install | |
| - name: Set environment variables | |
| run: | | |
| echo "BASE_PATH=$HOME/auv_data" >> $GITHUB_ENV | |
| echo "CAL_DIR=$HOME/auv_data" >> $GITHUB_ENV | |
| - name: Download and unzip required data files | |
| run: | | |
| mkdir -p "$HOME/auv_data" | |
| # Dorado389.tar.gz contains original log files of short dorado mission for testing: 2011.256.02 | |
| wget -q --no-check-certificate -O "$HOME/auv_data/Dorado389.tar.gz" https://stoqs.mbari.org/auv_data/Dorado389.tar.gz | |
| tar -xvf "$HOME/auv_data/Dorado389.tar.gz" -C "$HOME/auv_data" 2> /dev/null | |
| # i2MAP.tar.gz contains original log files of i2MAP mission for testing: 2018.34.01 | |
| wget -q --no-check-certificate -O "$HOME/auv_data/i2map.tar.gz" https://stoqs.mbari.org/auv_data/i2map.tar.gz | |
| tar -xf "$HOME/auv_data/i2map.tar.gz" -C "$HOME/auv_data" 2> /dev/null | |
| # i2map processing needs access to calibration files on an on-premisis server, unpack a subset of it here | |
| wget -q --no-check-certificate -O "$HOME/auv_data/SBE-43.tar.gz" https://stoqs.mbari.org/auv_data/SBE-43.tar.gz | |
| tar -xf "$HOME/auv_data/SBE-43.tar.gz" -C "$HOME/auv_data" 2> /dev/null | |
| - name: Run tests | |
| run: poetry run pytest |