Workshop-Treatment-Markers

The program is used to determine treatment choice based on biomarkers.

The are 2 main files in the project.

1. Function.R: Running this function loads the dataset, assigns variable names and initializes functions

• loads the dataset
• installs necessary packages
• creates factor columns
• assigns the marker variables, treatment variables and outcome variables.
• Contains functions that will be used in the Runscripts.R file

2. Runscripts.R: Runs the previously initialized functions

Function.R script has to be run before the Runscripts.R script.

Requirements: R versioh: R-3.5.1 Packages:

• pROC_1.16.1