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1. DCCI-medidata-analysis DCCI-medidata-analysis Public

   Modular R framework for medical data analysis with automated statistical testing, visualization, and HTML reports

   R

2. RNA-Seq-Nextflow RNA-Seq-Nextflow Public

   Containerized, scalable Nextflow RNA-Seq pipeline with modular QC (FastQC/MultiQC), alignment (STAR/HISAT2), quantification (Salmon/featureCounts), differential expression (DESeq2), Docker support,…

   Nextflow

3. TIP4P-Water-Model TIP4P-Water-Model Public

   Reproducible MD scripts and results comparing TIP4P and TIP4P/Ice water models across structural, dynamic, and thermodynamic properties.

   Python

4. DNA-Assembly-Problem-Solver DNA-Assembly-Problem-Solver Public

   DNA sequence reconstruction via genetic algorithms for SBH, featuring adaptive crossover and robust error handling.

   C++

5. Molecular-Dynamics-Simulator Molecular-Dynamics-Simulator Public

   2D MD simulator with Lennard-Jones forces on a Boltzmann lattice, all-pairs force calculations, and visualization - soon evolving to 3D water-solute modeling.

   C++

6. Komputerowe-Projektowanie-Lekow/pmarlo Komputerowe-Projektowanie-Lekow/pmarlo Public

   Python