Skip to content

jordancheah/DNA-Sequencing-Boyer-Moore-Approximate-Matching

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

4 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

DNA Sequencing Algorithms with Approximate Matching: Boyer-Moore, K-Mer Index, Pigeon-Hole.

Several DNA sequencing algorithms are coded in Python:

  • Generic Naive Approximate Matching allows up to n mismatches

  • Boyer-Moore Pre-processing with approximate matching

  • Pigeon Hole with Boyer-Moore and approximate matching

  • Pigeon Hole with K-Mer Index and approximate matching

About

Several DNA sequencing algorithms coded in Python: Boyer-Moore, Pigeon Hole, k-mer, Naive, Approximate Matching

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Contributors 2

  •  
  •  

Languages