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1. pandoc-ditaa pandoc-ditaa Public

   Pandoc-ditaa is a pandoc lua filter that used ditaa to convert ascii digrams in markdown files into images.

   Lua

2. nbib-to-bib nbib-to-bib Public

   Converts a nbib file to a bibtex file

   C 5

3. fluDI fluDI Public

   Find complete diRNA and vRNA influenza reads ids in long reads. Use something like fqGetIds or seqkit to extract reads by read ids.

   C

4. getHaPath getHaPath Public

   Checks to see if a flu HA sequence belongs to a high path or low path flu strain.

   C

5. bioTools bioTools Public

   a series small, niche biiology tools. These are not overall very usefull, except to me.

   C

6. freezeTB freezeTB Public

   freezeTb is a program that detects gene mutations associated with drug resistance from nanopore sequenced tuberculosis samples. It also outputs a set of consensus fragments (as a sam file) and chec…

   C