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CLASTR WIP #24

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Merged
merged 30 commits into from
May 30, 2024
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8a9c4f1
Merge pull request #14 from j-andrews7/dev
j-andrews7 Apr 17, 2024
5961969
clastr api proof of concept
MikeWLloyd May 1, 2024
9916ad9
query row added, UI adjustment
MikeWLloyd May 2, 2024
9bba28f
tooltip added, help updated, req for deploy updated
MikeWLloyd May 2, 2024
1cd2ef4
add window title
MikeWLloyd May 3, 2024
8645320
clastr batch method rough in
MikeWLloyd May 9, 2024
1bd91a9
add requirements, bump version
j-andrews7 May 14, 2024
579a1cf
fix for #26
MikeWLloyd May 16, 2024
77529be
additional tweaks for #26
j-andrews7 May 16, 2024
771c133
add marker check for single query
MikeWLloyd May 16, 2024
815036f
conditional batch options. modal notice for malformed markers.
MikeWLloyd May 16, 2024
3d5d412
global clastr function
MikeWLloyd May 20, 2024
2696ce9
clastr unit test
MikeWLloyd May 20, 2024
3191368
catch non-int thresholds
MikeWLloyd May 21, 2024
27f04c2
fix for #25, docstrings added
MikeWLloyd May 24, 2024
8e1a338
NoneType catch
MikeWLloyd May 24, 2024
e5e4a30
doc updates
MikeWLloyd May 24, 2024
26c2883
Fix #28
j-andrews7 May 28, 2024
38bdb08
remove debug print statement
MikeWLloyd May 28, 2024
4505bd6
linting, minor UI tweaks
j-andrews7 May 29, 2024
2f87d58
more linting
j-andrews7 May 29, 2024
30a3689
Help file typos & formatting
j-andrews7 May 29, 2024
158b2de
update lock file
j-andrews7 May 29, 2024
aed4430
Update CHANGELOG.md
j-andrews7 May 30, 2024
9dd839d
Remove old paper drafts and JOSS workflow
j-andrews7 May 30, 2024
4e940f7
add version, i hate scrolling
j-andrews7 May 30, 2024
c62eaba
doc updates
j-andrews7 May 30, 2024
fdeda54
format README
j-andrews7 May 30, 2024
8f0588d
add CLASTR reference
j-andrews7 May 30, 2024
c1d8fcf
Update README.md
j-andrews7 May 30, 2024
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3 changes: 3 additions & 0 deletions app.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
from strprofiler.shiny_app.shiny_app import create_app

app = create_app()
114 changes: 75 additions & 39 deletions poetry.lock

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

2 changes: 1 addition & 1 deletion pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ readme = "README.md"

[tool.poetry.dependencies]
python = ">=3.9,<4.0"
pandas = "^1.4.3"
pandas = "^2.2"
rich-click = "^1.5.2"
numpy = "^1.26.3"
openpyxl = "^3.0.10"
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5 changes: 4 additions & 1 deletion requirements.txt
Original file line number Diff line number Diff line change
@@ -1,7 +1,10 @@
# Automatically generated by https://github.com/damnever/pigar.

faicons==0.2.2
flatten-json==0.1.14
numpy==1.26.3
pandas==1.5.3
pandas==2.2.2
requests==2.31.0
rich-click==1.7.3
shiny==0.8.1
shinyswatch==0.4.2
Expand Down
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