Pinned Loading

1. cellxgene_VIP cellxgene_VIP Public

   Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also…

   Jupyter Notebook 149 50

2. CellDepot CellDepot Public

   CellDepot: A unified repository for scRNA-seq data and visual exploration. J Mol Biol. 2021 Dec 28:167425. doi: 10.1016/j.jmb.2021.167425.

   JavaScript 24 9

3. scRNAsequest scRNAsequest Public

   scRNASequest: an ecosystem of scRNA-seq analysis, visualization and publishing. BMC Genomics 24, 228 (2023).

   R 26 3

4. FundusNet FundusNet Public

   FundusNet: A Deep-Learning Approach for Fast Diagnosis of Neurodegenerative and Eye Diseases Using Fundus Images.

   Python 5 2

5. ScaleSC ScaleSC Public

   ScaleSC: A superfast and scalable single cell RNA-seq data analysis pipeline powered by GPU. https://doi.org/10.1101/2025.01.28.635256

   Python 29 4

6. TransgeneSeq TransgeneSeq Public

   Benchmarking and optimization of a high-throughput sequencing based method for transgene sequence variant analysis in biotherapeutic cell line development

   R