OceanWorldsLocalNPDR

Support for submitted paper:

IRMS plus time-series features Biosignature Data and Simulated Data

data/

Analysis Scripts

Analysis for real biosignature data: bio_local_npdr.R.

Analysis for simulated data: `sim_local_npdr.R.`

Scripts need functions sourced from `local_npdr_functions.R.` These will be added to npdr library.

Installation

To use NPDR, install the R library as follows. Check other standard dependencies.

# install.packages("devtools") # uncomment to install devtools
library(devtools)
devtools::install_github("insilico/npdr")
library(npdr)

Other possible dependencies for running analysis script:

install.packages(c("ranger", "reshape2", "dplyr", "caret", "glmnet"))
install.packages(c("speedglm", "wordspace", "doParallel", "foreach"))

Authors

Lily Clough and Brett McKinney

Contact

brett.mckinney@gmail.com

Websites

• insilico Github Organization

• insilico McKinney Lab

Related references

• NPDR github