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alter var_labels #1423

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Merged
merged 4 commits into from
Jun 12, 2025
Merged

alter var_labels #1423

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32ce7ba
alter var_labels
shajoezhu Jun 10, 2025
b32a31e
update
shajoezhu Jun 10, 2025
06f9b92
fix issue
shajoezhu Jun 11, 2025
fc99acb
update news
shajoezhu Jun 12, 2025
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2 changes: 2 additions & 0 deletions DESCRIPTION
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Original file line number Diff line number Diff line change
Expand Up @@ -66,6 +66,8 @@ Suggests:
svglite (>= 2.1.2),
testthat (>= 3.1.9),
withr (>= 2.0.0)
Remotes:
insightsengineering/rtables@main
VignetteBuilder:
knitr,
rmarkdown
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3 changes: 3 additions & 0 deletions NEWS.md
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@@ -1,5 +1,8 @@
# tern 0.9.8.9002

### Enhancements
* Code enhancement in `tabulate_rsp_subgroups` and `tabulate_survival_subgroups`, adding `parent_name` when using `split_rows_by` and `analysis` on the same variable multiple times, enhancing the table paths. Upstream enhancement from `rtables`.

### Bug Fixes
* Fixed bug in `g_lineplot()` where `table_format` and `table_labels` arguments were ignored.
* Fixed bug in `g_lineplot()` not being able to take a function as a format for table stats.
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12 changes: 8 additions & 4 deletions R/response_subgroups.R
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Expand Up @@ -354,7 +354,8 @@ tabulate_rsp_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("content"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "All Patients"
)
lyt_prop <- analyze_colvars(
lyt = lyt_prop,
Expand All @@ -370,7 +371,8 @@ tabulate_rsp_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("analysis"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "analysis rows"
)
lyt_prop <- split_rows_by(lyt = lyt_prop, var = "var_label", nested = TRUE)
lyt_prop <- analyze_colvars(
Expand Down Expand Up @@ -401,7 +403,8 @@ tabulate_rsp_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("content"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "All Patients"
)
lyt_or <- analyze_colvars(
lyt = lyt_or,
Expand All @@ -418,7 +421,8 @@ tabulate_rsp_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("analysis"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "analysis rows"
)
lyt_or <- split_rows_by(lyt = lyt_or, var = "var_label", nested = TRUE)
lyt_or <- analyze_colvars(
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12 changes: 8 additions & 4 deletions R/survival_duration_subgroups.R
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Expand Up @@ -360,7 +360,8 @@ tabulate_survival_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("content"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "All Patients"
)
lyt_survtime <- analyze_colvars(
lyt = lyt_survtime,
Expand All @@ -376,7 +377,8 @@ tabulate_survival_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("analysis"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "analysis rows"
)
lyt_survtime <- split_rows_by(lyt = lyt_survtime, var = "var_label", nested = TRUE)
lyt_survtime <- analyze_colvars(
Expand Down Expand Up @@ -407,7 +409,8 @@ tabulate_survival_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("content"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "All patient row"
)
lyt_hr <- analyze_colvars(
lyt = lyt_hr,
Expand All @@ -424,7 +427,8 @@ tabulate_survival_subgroups <- function(lyt,
var = "row_type",
split_fun = keep_split_levels("analysis"),
nested = FALSE,
child_labels = "hidden"
child_labels = "hidden",
parent_name = "analysis rows"
)
lyt_hr <- split_rows_by(lyt = lyt_hr, var = "var_label", nested = TRUE)
lyt_hr <- analyze_colvars(
Expand Down
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