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1. bubble_gun bubble_gun Public

   Python 42 3

2. gfa_subgraphs gfa_subgraphs Public

   Extracts subgraphs or components from a graph in GFA format

   Python 24

3. PanPA PanPA Public

   PanPA is a tool for building panproteome graphs and aligning sequences back to the graphs.

   Python 14

4. extgfa extgfa Public

   External GFA (on disk) representation of GFA files (proof of concept)

   Python 7

5. smith_waterman_cython smith_waterman_cython Public

   A test implementation of Smith Waterman algorithm with Cython

   Python 2

6. bernatgel/karyoploteR bernatgel/karyoploteR Public

   karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

   R 337 44