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SubTelOmics Read Miner: A pipeline that extracts telomeric and subtelomeric repeat reads of interest from large genomic cancer datasets.

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STORM: SubTelOmics Read Miner

STORM is a computational pipeline that extracts telomeric reads, subtelomeric repeat reads and subtelomere-adjacent 1-copy reads from large genomic cancer datasets.

  • Nextflow
  • AWS HealthOmics

References

Adam E., Stilwell T., Ranjan D., Riethman H., “Development and Deployment of a Genomic Cancer Data Extraction Pipeline on the Cloud” 2025 IEEE 39th International Parallel and Distributed Processing Symposium Workshops (IPDPSW), Milan, Italy, 2025. DOI: 10.1109/IPDPSW66978.2025.00145

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SubTelOmics Read Miner: A pipeline that extracts telomeric and subtelomeric repeat reads of interest from large genomic cancer datasets.

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