Post june #109
Post june #109
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Pull Request Overview
This PR updates several files to refresh submodule pointers, add RDS file saving for reproducibility in blog posts, and modify build process messaging.
- Updated submodule commit for theme "hugo-igloo".
- Added RDS output code blocks in RMarkdown/Quarto blog posts to persist intermediate dataset states.
- Updated GitHub Actions build workflow to print messages for production and preview builds.
Reviewed Changes
Copilot reviewed 35 out of 35 changed files in this pull request and generated 2 comments.
Show a summary per file
| File | Description |
|---|---|
| themes/hugo-igloo | Updated submodule commit hash. |
| content/blog/2025/06-01_longcovid_clusters/test.R | Added R code for data transformation and output, using dplyr/tidyr. |
| content/blog/2025/05-01_visible/index.qmd | Added R code blocks to save RDS files and minor text adjustments. |
| content/blog/2025/05-01_visible/index.md | Similar R code updates as in the QMD version with file output. |
| .github/workflows/build-site.yaml | Inserted echo messages to indicate the build type in the CI workflow. |
| out <- .df %>% | ||
| dplyr::select(!!!.vars, value = !!value_var) %>% | ||
| dplyr::mutate(..r = dplyr::row_number()) %>% | ||
| tidyr::gather(x, node, -..r, -value) %>% |
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Consider using tidyr::pivot_longer as gather() is deprecated in favor of pivot_longer, which may offer improved clarity and support in future versions.
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| @@ -651,7 +664,7 @@ remove_0_cols <- function(data) { | |||
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| ### Clustering | |||
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| Just for better modelling, we scale the data, then fit a Ward.D2 model with eucledian distance. | |||
| Just for better modelling, we scale the data, then fit a Ward.D2 model with euclidian distance. | |||
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The term 'euclidian' appears to be misspelled; consider correcting it to 'Euclidean' for clarity and consistency.
| Just for better modelling, we scale the data, then fit a Ward.D2 model with euclidian distance. | |
| Just for better modelling, we scale the data, then fit a Ward.D2 model with Euclidean distance. |
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Pull Request Overview
This PR, titled "Post june", updates the Hugo submodule reference and introduces new R code blocks in the blog posts to save intermediate R objects, along with minor workflow enhancements for build logging.
- Updated subproject commit in themes/hugo-igloo
- Added new R code blocks in both index.qmd and index.md to save RDS files and modified an in-code comment
- Enhanced build-site workflow with echo messages for production and preview builds
Reviewed Changes
Copilot reviewed 34 out of 34 changed files in this pull request and generated 1 comment.
| File | Description |
|---|---|
| themes/hugo-igloo | Updated the submodule commit reference |
| content/blog/2025/05-01_visible/index.qmd | Added R code blocks to save R objects and updated a comment in the modelling section |
| content/blog/2025/05-01_visible/index.md | Synchronized similar R code block additions and metadata adjustments |
| .github/workflows/build-site.yaml | Introduced echo messages to distinguish between production and preview builds |
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
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🎉 The preview is built! Check it out 👀 |
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🎉 The preview is built! Check it out 👀 |
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🎉 The preview is built! Check it out 👀 |
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🎉 The preview is built! Check it out 👀 |
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🎉 The preview is built! Check it out 👀 |
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