Feature/cluster 1

.github/workflows/pr.yml

@@ -13,27 +13,27 @@ jobs:
     strategy:
       max-parallel: 4
       matrix:
-        python-version: ["3.11"]
         os: [ubuntu-latest, macos-13, windows-latest]
     runs-on: ${{ matrix.os }}
     timeout-minutes: 20
     steps:
     - uses: actions/checkout@v4
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v4
+    - name: Install uv
+      uses: astral-sh/setup-uv@v5
       with:
-        python-version: ${{ matrix.python-version }}
-        cache: 'pip' # caching pip dependencies
+        enable-cache: true
+    - name: "Set up Python"
+      uses: actions/setup-python@v5
+      with:
+          python-version-file: "pyproject.toml"
     - name: run on mac
       if: startsWith(matrix.os, 'mac')
       run: |
         brew install libomp
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install -r requirements.txt
-        python -m spacy download en_core_web_sm
-    - name: Test with pytest
+    - name: Install the project
       run: |
-        pip install pytest
-        pytest
+        uv sync --all-extras --dev
+        uv pip install pip
+        uv run python -m spacy download en_core_web_sm
+    - name: Run tests
+      run: uv run pytest tests

.gitignore

@@ -20,6 +20,7 @@ __pycache__/*
 .idea
 .venv
 conda
+uv.lock
 
 # Package files
 *.egg

notes/conda.md

@@ -0,0 +1,12 @@
+conda create --name qrmine python=3.11
+conda activate qrmine
+
+conda install conda-forge::uv
+uv pip install ini2toml
+ini2toml setup.cfg -o pyproject.toml
+uv pip install -e .
+python -m spacy download en_core_web_sm
+
+
+
+pip3 install torch==2.3.1+cpu -f https://download.pytorch.org/whl/torch_stable.html

notes/new-process.md

@@ -0,0 +1,34 @@
+conda install conda-forge::uv
+uv pip install ini2toml
+ini2toml setup.cfg -o pyproject.toml
+
+delete setup.cpg
+delete requirements.txt, dev-requirements.txt, dev-requirements.in
+remove deps from tox.ini
+
+uv pip install -e .
+see pr.yml for GitHub actions
+see pyproject.toml for pytorch cpu install
+uv pip install -e .
+
+uv sync --all-extras --dev
+uv pip install pip
+uv run python -m spacy download en_core_web_sm
+
+pyproject.toml
+requires = ["setuptools>=61.2", "wheel", "pip"]
+
+dev = [
+    "setuptools",
+    "setuptools_scm",
+    "pytest",
+    "pytest-cov",
+    "tox",
+    "black",
+    "recommonmark",
+    "sphinx",
+    "wheel",
+    "twine",
+    "tox",
+]
+

notes/pip-tools.md

@@ -21,4 +21,7 @@ OR
 
 * pip install uv
 * uv pip compile setup.cfg -o requirements.txt --universal
-* uv pip compile dev-requirements.in -o dev-requirements.txt --universal
+* uv pip compile dev-requirements.in -o dev-requirements.txt --universal
+
+uv pip install ini2toml
+ini2toml setup.cfg -o pyproject.toml