MetaSBT is a scalable framework designed to automatically index microbial genomes and accurately characterize metagenome-assembled genomes using Sequence Bloom Trees.
👉 Get started with MetaSBT by visiting our official wiki.
We also maintain a collection of public databases built with MetaSBT from curated sets of microbial genomes. You can explore and use them from the MetaSBT-DBs repository.
Note
Interested in using MetaSBT or our databases, or building your own private database but lack the necessary computational resources? Reach out to us! We’re always open to collaborations.
If you use MetaSBT in your work, please cite:
Manuscript in preparation
Long-term discussion and bug reports are maintained via GitHub Discussions and Issues, while code review is managed via GitHub Pull Requests.
Before contributing, please:
- Check for existing issues or PRs related to your topic;
- Write clear and concise titles and descriptions;
- Include steps to reproduce bugs, relevant logs, version info, and other technical details when appropriate.
Need help?
Open an Issue or start a Discussion — we're happy to assist with any questions or technical problems.
Copyright © 2025 Fabio Cumbo, Daniel Blankenberg. See LICENSE for additional details.