collaborativebioinformatics
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- Haploblock_Clusters_ElixirBH25 Public Forked from jedrzejkubica/Elixir-BH-2025
Elixir BioHackathon 2025 Project 4: Beyond beacons: Establishing genomic background in European and international biobanks
collaborativebioinformatics/Haploblock_Clusters_ElixirBH25’s past year of commit activity - GeNETwork Public
Build a knowledge graph connecting variants, drugs, and clinical evidence to identify therapeutic opportunities (e.g. CIViC - Clinical Interpretations of Variants in Cancer)
collaborativebioinformatics/GeNETwork’s past year of commit activity - ODP_hackathon_supplemental_materials Public
Supplemental Materials from the AWS ODP - NVIDIA Knowledge Graph Hackathon
collaborativebioinformatics/ODP_hackathon_supplemental_materials’s past year of commit activity - BioGraphRAG Public
Implement a system to use GNN and/or LLM to use knowledge graphs to integrate literature with knowledge graphs made from large public datasets (CIVIC, TCGA, CPTAC)
collaborativebioinformatics/BioGraphRAG’s past year of commit activity - ClassiGraph Public
Develop a graph neural network to integrate proteomic and genomic features for cancer subtype classification (e.g. CPTAC-2 and CPTAC-3 breast, colorectal, and ovarian cancer data)
collaborativebioinformatics/ClassiGraph’s past year of commit activity - CNVision Public
collaborativebioinformatics/CNVision’s past year of commit activity - Model_Garbage_Collection Public
Implement a system to prune erroneous model assertions in knowledge graphs derived from GNN and/or LLM models or agents.
collaborativebioinformatics/Model_Garbage_Collection’s past year of commit activity - MethSmoothEval Public
collaborativebioinformatics/MethSmoothEval’s past year of commit activity - MIDAS Public
Implement a system to combine existing knowledge graphs (e.g. DisGeNet) with primary datasets (e.g. TCGA, 1000 genomes)
collaborativebioinformatics/MIDAS’s past year of commit activity
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