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Releases: cantinilab/Circe

v0.3.8-alpha

25 Jun 00:34
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1st release for handling huge datasets.

What's new:

  • Parallelize choice of random windows and parameter calibration
  • Updated memory usage and covariance to only store non only-0s cells per DNA window
    --> Work on atlases
  • Accept chromosome sizes as a parameter (should very slightly change results if used)
  • Minor bug fixes

v0.3.6-beta.1

14 Apr 21:11
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Update wheels.yml

v0.3.6

14 Apr 18:52
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v0.3.6 Pre-release
Pre-release

Release for the 1st manuscript.

What's new:

Parallelize run on chromosomes
Speed up alpha calculation
Visualize gene coordinates alongside the DNA regions network