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Center for Animal Disease Modeling and Surveillance

8 followers
https://cadms.vetmed.ucdavis.edu

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resfinder resfinder Public

Python 14 5
auspice auspice Public

JavaScript
entrez entrez Public

Forked from leobel/entrez

gem for HTTP requests to Entrez E-utilities

Ruby
eutils eutils Public

Forked from seouri/eutils

NCBI eUtils Ruby API

Ruby
msa msa Public

Forked from niaid/msa

Modular BioJS compoment for a multiple sequence alignment

JavaScript
NAHLN_AMR NAHLN_AMR Public

Forked from USDA-VS/NAHLN_AMR

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All CSS GAML HTML JavaScript Nextflow Python Ruby

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Showing 10 of 15 repositories

msa Public Forked from niaid/msa
Modular BioJS compoment for a multiple sequence alignment

cadms/msa’s past year of commit activity

JavaScript 0 BSL-1.0 81 0 0 Updated Aug 12, 2025
resfinder-nf Public
Resfinder Nextflow Workflow

cadms/resfinder-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Feb 7, 2025
bacmet-nf Public
Nextflow Pipeline for running Bacmet

cadms/bacmet-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Feb 7, 2025
rgi-nf Public
Resistance Gene Identifier Nextflow Workflow

cadms/rgi-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Feb 7, 2025
mrsa-abm Public
This repo contains the code for the project: Geographic disparities in CA-SSTIs observed in EHR data are likely due to determinants beyond healthcare-seeking behaviours, such as SES and environmental factors.

cadms/mrsa-abm’s past year of commit activity

GAML 0 0 0 0 Updated Oct 30, 2024
mge-finder-nf Public
Nextflow Pipeline for MobileElementFinder

cadms/mge-finder-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Aug 13, 2024
plasmidfinder-nf Public
Nextflow Pipeline for Plasmid Finder by CGE

cadms/plasmidfinder-nf’s past year of commit activity

Nextflow 0 MIT 0 0 0 Updated Apr 17, 2024
mpm207 Public
Applied Epidemiology Problem Solving

cadms/mpm207’s past year of commit activity

HTML 0 0 0 0 Updated Mar 13, 2024
plasmidfinder Public
Mirror of PlasmidFinder 2.1

cadms/plasmidfinder’s past year of commit activity

Python 0 0 0 0 Updated Feb 26, 2024
resfinder Public

cadms/resfinder’s past year of commit activity

Python 14 5 7 2 Updated Nov 16, 2023

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