Skip to content

Raise a validation error if there are SNV_INDEL symbolic alleles (#884) #886

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 1 commit into from
Sep 3, 2024

Conversation

bpblanken
Copy link
Collaborator

  • Filter NON_REF and raise a validation error if there are other SNV_INDEL symbolic alleles

  • ruff

  • wrong sign

  • Update validate_callset.py

  • Update validate_callset.py

  • Adjust error message to use a set

  • ruff format

  • fix

  • ruff

  • misc

* Filter NON_REF and raise a validation error if there are other SNV_INDEL symbolic alleles

* ruff

* wrong sign

* Update validate_callset.py

* Update validate_callset.py

* Adjust error message to use a set

* ruff format

* fix

* ruff

* misc
@bpblanken bpblanken requested a review from a team as a code owner September 3, 2024 16:12
@bpblanken bpblanken merged commit d010aa0 into main Sep 3, 2024
4 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant