Add back the "print" lint rule #791
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bpblanken
commented
May 23, 2024
| dataset_type, | ||
| query, | ||
| ) | ||
| print(f'Uploading ht to {destination_path}') |
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There is a print here, but this file should be deleted regardless.
jklugherz
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May 23, 2024
bpblanken
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May 28, 2024
* Miscellaneous VEP tweaks * Benb/validate with allele type (#785) * Bump requirements * add validation * format * Fix syntax (#787) * Bump requirements * add validation * format * Fix syntax * allele registry (#759) * add allele registry step in update vat with samples task * shh * existing tests pass * fix test deps * test * annotation_dependencies * ruff * take out the zero check * fix requirements new task name * move vep into new variants task * only annotate lookup from callset_ht * clean up mocks * r * working * working? * not that * minor changes and test cases * most recent script * working version * fix the test * implement ht chunking * fix patches * fix patches * register now yields id map of returned caids * r * fix some tests * return a hail table instead * use __str__ * log to track variants we can't map back * move to gcs with flag * union ar_ht instead of a bunch of left joins to prevent CAID, CAID_1, CAID_2... * cleaner * it is all coming together now ' * gnomad ids for 37' * use genomicalleles and gnomad ids * secrets * secret * move stuff out of environment file * add more logging * fix test * fix the other test * ruff * test * comments * o * Reference Data Update Type Equality Check (#789) * Finish validity check test * ruff * update dbnsfp field * More types * more types * ugh * twiddle it back * update type * more tweaks * lint * fix floats * decompose * ruff formatg * Update compare_globals_test.py * print lint rule (#791) * tiny ar bug (#792) --------- Co-authored-by: Benjamin Blankenmeister <bblanken@broadinstitute.org> Co-authored-by: Benjamin Blankenmeister <b.p.blankenmeister@gmail.com>
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