ruff

Author: bpblanken

v03_pipeline/lib/paths.py

@@ -222,8 +222,8 @@ def valid_filters_path(
     callset_path: str,
 ) -> str | None:
     if (
-        not Env.EXPECT_WES_FILTERS or
-        not dataset_type.expect_filters(sample_type)
+        not Env.EXPECT_WES_FILTERS
+        or not dataset_type.expect_filters(sample_type)
         or 'part_one_outputs' not in callset_path
     ):
         return None

v03_pipeline/lib/tasks/write_remapped_and_subsetted_callset.py

@@ -54,8 +54,8 @@ def requires(self) -> list[luigi.Task]:
             RawFileTask(self.project_pedigree_path),
         ]
         if (
-            Env.CHECK_SEX_AND_RELATEDNESS and
-            not self.skip_check_sex_and_relatedness
+            Env.CHECK_SEX_AND_RELATEDNESS
+            and not self.skip_check_sex_and_relatedness
             and self.dataset_type.check_sex_and_relatedness
         ):
             requirements = [