ruff

bpblanken · bpblanken · commit bab5b5e51cff · 2024-06-20T21:34:48.000-04:00
diff --git a/v03_pipeline/lib/tasks/write_remapped_and_subsetted_callset.py b/v03_pipeline/lib/tasks/write_remapped_and_subsetted_callset.py
@@ -54,6 +54,7 @@ def requires(self) -> list[luigi.Task]:
             RawFileTask(self.project_pedigree_path),
         ]
         if (
+            Env.CHECK_SEX_AND_RELATEDNESS and
             not self.skip_check_sex_and_relatedness
             and self.dataset_type.check_sex_and_relatedness
         ):

Original file line number	Diff line number	Diff line change
`@@ -54,6 +54,7 @@ def requires(self) -> list[luigi.Task]:`
`54`	`54`	`RawFileTask(self.project_pedigree_path),`
`55`	`55`	`]`
`56`	`56`	`if (`
	`57`	`+ Env.CHECK_SEX_AND_RELATEDNESS and`
`57`	`58`	`not self.skip_check_sex_and_relatedness`
`58`	`59`	`and self.dataset_type.check_sex_and_relatedness`
`59`	`60`	`):`