Fix incorrect project in tests

bpblanken · bpblanken · commit 75b8f533e924 · 2024-10-10T09:58:11.000-04:00
diff --git a/v03_pipeline/lib/paths_test.py b/v03_pipeline/lib/paths_test.py
@@ -239,7 +239,7 @@ def test_project_remap_path(self) -> None:
                 SampleType.WGS,
                 'R0652_pipeline_test',
             ),
-            '/var/seqr/seqr-loading-temp/v3.1/GRCh38/SNV_INDEL/remaps/WGS/R0652_pipeline_remap.tsv',
+            '/var/seqr/seqr-loading-temp/v3.1/GRCh38/SNV_INDEL/remaps/WGS/R0652_pipeline_test_remap.tsv',
         )
 
     def test_project_pedigree_path(self) -> None:
@@ -250,5 +250,5 @@ def test_project_pedigree_path(self) -> None:
                 SampleType.WES,
                 'R0652_pipeline_test',
             ),
-            '/var/seqr/seqr-loading-temp/v3.1/GRCh38/GCNV/pedigrees/WES/R0652_pipeline_pedigree.tsv',
+            '/var/seqr/seqr-loading-temp/v3.1/GRCh38/GCNV/pedigrees/WES/R0652_pipeline_test_pedigree.tsv',
         )

Original file line number	Diff line number	Diff line change
`@@ -239,7 +239,7 @@ def test_project_remap_path(self) -> None:`
`239`	`239`	`SampleType.WGS,`
`240`	`240`	`'R0652_pipeline_test',`
`241`	`241`	`),`
`242`		`- '/var/seqr/seqr-loading-temp/v3.1/GRCh38/SNV_INDEL/remaps/WGS/R0652_pipeline_remap.tsv',`
	`242`	`+ '/var/seqr/seqr-loading-temp/v3.1/GRCh38/SNV_INDEL/remaps/WGS/R0652_pipeline_test_remap.tsv',`
`243`	`243`	`)`
`244`	`244`
`245`	`245`	`def test_project_pedigree_path(self) -> None:`
`@@ -250,5 +250,5 @@ def test_project_pedigree_path(self) -> None:`
`250`	`250`	`SampleType.WES,`
`251`	`251`	`'R0652_pipeline_test',`
`252`	`252`	`),`
`253`		`- '/var/seqr/seqr-loading-temp/v3.1/GRCh38/GCNV/pedigrees/WES/R0652_pipeline_pedigree.tsv',`
	`253`	`+ '/var/seqr/seqr-loading-temp/v3.1/GRCh38/GCNV/pedigrees/WES/R0652_pipeline_test_pedigree.tsv',`
`254`	`254`	`)`