prod release #101
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| name: prod release | |
| on: | |
| workflow_run: | |
| workflows: ["unit tests"] | |
| types: | |
| - completed | |
| branches: | |
| - main | |
| permissions: | |
| id-token: write | |
| contents: write | |
| jobs: | |
| release: | |
| runs-on: ubuntu-latest | |
| if: ${{ github.event.workflow_run.conclusion == 'success' }} | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.workflow_run.head_branch }} | |
| - name: set up python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: build package | |
| run: | | |
| rm -rf dist/ | |
| python -m pip install build | |
| python -m build | |
| - name: set tag name | |
| shell: bash | |
| run: | | |
| tag_name=`python3 -c "import v03_pipeline;print(v03_pipeline.__version__)"` | |
| echo "TAG_NAME=$tag_name" >> $GITHUB_ENV | |
| - name: authenticate to google cloud | |
| id: "auth" | |
| uses: google-github-actions/auth@v0 | |
| with: | |
| workload_identity_provider: "${{ secrets.WORKLOAD_IDENTITY_PROVIDER }}" | |
| service_account: "${{ secrets.RUN_SA_EMAIL }}" | |
| - name: "setup gcloud sdk" | |
| uses: google-github-actions/setup-gcloud@v0 | |
| - name: Copy files to release directory | |
| shell: bash | |
| run: |- | |
| gcloud storage rm -r gs://seqr-luigi/releases/prod/latest/ || echo 'No latest release' | |
| gcloud storage cp v03_pipeline/bin/* gs://seqr-luigi/releases/prod/latest/bin/ | |
| gcloud storage cp dist/*.whl gs://seqr-luigi/releases/prod/latest/pyscripts.zip | |
| gcloud storage cp v03_pipeline/bin/* gs://seqr-luigi/releases/prod/$TAG_NAME/bin/ | |
| gcloud storage cp dist/*.whl gs://seqr-luigi/releases/prod/$TAG_NAME/pyscripts.zip | |
| gcloud storage cp v03_pipeline/var/vep/* gs://seqr-reference-data/vep/ | |
| - name: Create tag | |
| uses: actions/github-script@v7 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| script: | | |
| github.rest.git.createRef({ | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| ref: 'refs/tags/${{ env.TAG_NAME }}', | |
| sha: context.sha | |
| }) |